Prodigiosinella confusarubida ATCC 39006: Ser39006_008785
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Entry
Ser39006_008785 CDS
T05290
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ser39006_008785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sera03400
]
Ser39006_008785
Enzymes [BR:
sera01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Ser39006_008785
DNA repair and recombination proteins [BR:
sera03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ser39006_008785
Prokaryotic type
Ser39006_008785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AUH04211
UniProt:
A0A2I5T5S7
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All DBs
Position
1887986..1888675
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AA seq
229 aa
AA seq
DB search
MESSFTWHDVLAQEKQQPYFINTLKFVSQERATGKVIYPPQKDVFNAFRFTEFNQVKVVI
LGQDPYHGPHQAHGLSFSVRPGVPAPPSLMNIYKELANDMPGFKIPTHGFLQSWAQQGVL
LLNTVLTVEAGKAHSHANLGWETFTDKVIEVLNAHREGVVFLLWGSHAQKKGNMIDCQRH
HVLKAPHPSPLSAHRGFLGCRHFSQANQFLEQQGITPIDWMPSLSENQE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcctttacctggcacgatgtgctggcccaagagaaacaacaaccttatttt
attaatacgctcaaattcgttagtcaggaacgcgctactggcaaggtgatttatccgccg
caaaaagatgttttcaacgcatttcgttttaccgaatttaatcaggtcaaggtcgttatc
ctggggcaagatccctatcatggacctcatcaggcgcatggactgtcattctcggtccgt
cctggagtgcctgcgccaccttcattgatgaacatctataaagaactggcgaatgacatg
cccggatttaaaataccgacacatgggtttctgcaaagctgggcacaacagggtgtgttg
ctccttaatactgttttaacggttgaagcgggtaaagcgcactcccatgccaatctggga
tgggaaacatttaccgataaggtgattgaagtattaaatgcccatcgggaaggggtggtg
tttttgctatggggatctcatgcgcaaaagaagggcaatatgattgattgccagcgtcat
catgttttgaaagcgcctcacccgtcgccactttctgctcatcgtggcttcctggggtgt
cgacatttttcgcaagccaatcaatttcttgagcaacaaggcattacgcccatagactgg
atgccgagtctgtctgaaaatcaggaatga
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