Prodigiosinella confusarubida ATCC 39006: Ser39006_009010
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Entry
Ser39006_009010 CDS
T05290
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00260
Glycine, serine and threonine metabolism
sera00460
Cyanoamino acid metabolism
sera00630
Glyoxylate and dicarboxylate metabolism
sera00670
One carbon pool by folate
sera00680
Methane metabolism
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01120
Microbial metabolism in diverse environments
sera01200
Carbon metabolism
sera01230
Biosynthesis of amino acids
sera01240
Biosynthesis of cofactors
sera04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ser39006_009010
09102 Energy metabolism
00680 Methane metabolism
Ser39006_009010
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ser39006_009010
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Ser39006_009010
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Ser39006_009010
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Ser39006_009010
Enzymes [BR:
sera01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Ser39006_009010
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AUH04247
UniProt:
A0A2I5TI67
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All DBs
Position
1951738..1952991
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AA seq
417 aa
AA seq
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MLKREMNIADYDAELWQAMQQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKALFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYNVIPYGIDDNGKIDYDEMAELARTHQPKMIIGGFSAYSGI
VDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPSPVPHAHIVTTTTHKTLAGPRGGLIL
AYGGSEDLYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VVLSRGYNVVSGGTDNHLFLLDLVSKNITGKEADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGTPAATRRGFKEAEVRELAGWICDVLDNINDEAVIERTKQKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaattgtggcaagcaatgcag
caagaagtggtgcgtcaggaagagcatattgaactgattgcttcagaaaactataccagc
ccccgcgtcatgcaggctcaagggtctcagctgaccaataaatatgcggaaggttatccg
gggaagcgttattacggcggttgcgagtatgttgatgtagtagaacagctggcgattgat
cgtgcaaaagcgttgttcggtgcagattatgccaatgttcagccgcactccggttctcaa
gccaacttcgctgtttataccgcgttactacaaccgggcgatacgattctggggatgaat
ctggcacatggcggtcatctgacccatggttcgccggtcaatctgtctggtaagttgtat
aacgtgattccttatggtatcgacgacaatggcaaaattgactacgacgaaatggctgag
ctggcgcgtactcatcagccgaaaatgatcatcggtggtttctctgcctattctggtatt
gttgactgggcgaaaatgcgtgaaatcgctgacagcatcggtgcttatctgtttgttgat
atggctcatgtggctggtttggtggcagctggcgtttacccgagcccggttccgcatgca
cacattgttaccactacaacgcacaaaaccctggcgggtccgcgtggtggcctgattttg
gcttacggtggtagtgaagatctgtataaaaagctgaattctgctgtattcccgggcgga
caaggtggcccgctgatgcatgttatcgctggtaaagcggtagcactgaaagaagcgatg
gagcctgagttcaaggtttatcagcagcaggtggccaagaatgccaaggcgatggtggaa
gttgtgctgtcccgtggttataacgtggtctccggtggtacagataatcacctgttccta
ctggacctggtgagtaaaaatatcaccggtaaagaggctgacgccgcactaggtcgcgct
aatatcaccgtgaacaagaatagcgtacctaacgatccgaagagcccatttgtgacatcc
ggtgttcgtatcggtacgcctgccgcgacccgtcgtggtttcaaagaagccgaagttcgc
gaactggctggctggatctgtgatgtactggataacatcaatgacgaagccgttattgaa
cgtactaaacagaaagttctggatatctgcgctcgtttcccagtttacgcataa
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