Prodigiosinella confusarubida ATCC 39006: Ser39006_009150
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Entry
Ser39006_009150 CDS
T05290
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sera03009
]
Ser39006_009150 (der)
Ribosome biogenesis [BR:
sera03009
]
Prokaryotic type
GTPases
Ser39006_009150 (der)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
Ras
AAA_22
Roc
AAA_24
NTPase_1
TniB
SRPRB
SRP54
Motif
Other DBs
NCBI-ProteinID:
AUH04274
UniProt:
A0A2I5T5W4
LinkDB
All DBs
Position
1978514..1980004
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AA seq
496 aa
AA seq
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MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGNEFIVIDTGGI
DGSEEGVETRMAGQSLQAIEEADIVLFMVDARDGLMPADRGIAQHLRSREKPTFLVANKI
DGIDADTGIADFYSLGLGEVYPIAASHGRGVTSLLEKALLPFIGEAPEPKELTEEEANAA
YWAEQLAEQQSDSENSEPKDDFDPESLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMP
GTTRDSIYIPMERDGREYVLIDTAGVRKRGKITETVEKFSVIKTLQAIEDANVVLLVIDA
REGISDQDLSLLGFILNAGRSLVIVVNKWDGLSQEVKDQVKETLDMRLGFIDFARIHFIS
ALHGSGVGNLFESVTEAYTCSTRRVGTSMLTRIMQMAADDHQPPLVRGRRVKLKYAHAGG
YNPPIVVIHGNQVKDLPDSYKRYLMNYYRRSLDVMGTPIRIQFKEGENPFADKRNTLTPN
QLRKRKRLIQHIKKGK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgtcgtcgcgctggtcgggcgcccgaatgtgggtaaatccacgctgtttaac
cgcttgacgcgtacccgtgatgcattggtggcggatttcccagggctgacgcgtgaccgc
aagtatggtcgtgctgaggtagaagggaatgaatttattgtcattgataccggaggcatc
gatggtagtgaggaaggggtggaaacacgtatggcaggccaatcactgcaagctatcgaa
gaggccgatatcgtcctgttcatggtggatgcccgtgatggtttaatgccggcagatcgc
ggcatcgcccagcatctgcgcagtcgtgaaaagcccaccttcctggttgccaacaaaatt
gacgggattgacgcggatactggtattgccgatttttactcgttgggattaggcgaagtg
taccctatcgcagcatctcatggtcgaggtgtcacttcattgctggaaaaggctctactg
ccttttattggtgaggcgcctgaaccgaaagaactgacggaagaagaggctaatgcggcc
tattgggcggagcaattggctgagcagcagtccgatagcgaaaatagcgaaccgaaggat
gatttcgatcccgaatcgttacccattaaactggctattgtcgggcggcccaatgttggt
aagtccacgctcaccaatcggattttgggtgaagatcgtgtggtggtttacgatatgccg
ggaaccacccgggacagtatctatattccaatggaacgtgacggccgtgaatatgtcctg
atcgatactgccggagtccgtaagcgtgggaaaataaccgagacggtagagaagttttcg
gttattaaaaccctacaggcgattgaagatgcgaatgtagtcctgttggtgattgatgcc
cgggaaggtatttctgatcaggatctctcgctgctgggctttattctcaatgctggccgt
tcgctggtgattgtggtcaataaatgggatgggttgtcacaggaagtaaaagatcaggtg
aaagaaacattggatatgcgcctgggctttattgattttgcccgtatccatttcatttct
gcgttgcatggcagtggtgtcgggaatttgtttgagtcagtcactgaagcttacacatgc
tctactcgtcgggtaggaacttccatgctgacccgtatcatgcagatggcggcagatgac
catcagccaccgttggtgcgtggtcgccgagtaaaactgaaatatgcacatgccggtggc
tataatccaccgattgtcgttattcacggcaatcaggtaaaagatctgccggattcctat
aaacgctacctgatgaattattaccgtcgttcactggatgttatgggaacgccaatccgt
attcagttcaaagaaggtgagaatccctttgcggataagcgcaacacattgactccaaat
cagcttcgtaagcgcaaacgtttgatacagcacatcaagaaaggtaagtaa
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