Prodigiosinella confusarubida ATCC 39006: Ser39006_010930
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Entry
Ser39006_010930 CDS
T05290
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ser39006_010930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sera03400
]
Ser39006_010930
Enzymes [BR:
sera01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Ser39006_010930
DNA repair and recombination proteins [BR:
sera03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ser39006_010930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Phage_TAC_7
TetR_C_34
Motif
Other DBs
NCBI-ProteinID:
AUH04592
UniProt:
A0A2I5TJ83
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All DBs
Position
2382076..2382687
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AA seq
203 aa
AA seq
DB search
MTFFIYGDTETDWLSKRDKRMAEAIARFGVIRRPSMPDLFSALVTYIVEQQISVAAARTV
NQRLLTLCDGALTPESVYNLSPEDIQACGMTMKKAHYILGVAQSAVSGAVDLSAVQHMDD
QAVIKTLTTLNGVGVWTVEMLLIFSLRRPDVLSWGDLAIQRGMMRLYHHKKLSREQFERY
RRRYSPYGTTASFYLWEMAKEIP
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgactttttttatttatggtgataccgaaactgactggttaagcaagcgtgataaacga
atggcggaggctatcgcgcggttcggtgttattcgccgtccgtccatgccggatttattc
agcgcactggtgacctatattgttgaacaacagatatcagttgcggctgccagaacggtg
aatcagcgattattaacattgtgcgatggcgcattaacccctgaaagcgtgtacaacctc
agcccggaggatattcaggcatgtggtatgaccatgaaaaaggcccattacattctgggg
gtagcgcaatctgctgtcagcggggcagtggatctgtcggcggttcagcatatggatgat
caggcggtgataaaaaccctgaccacgctgaacggtgtcggcgtctggactgtcgaaatg
ctattgattttttcactgcgccggcctgatgtgttgagctggggggatctggccattcag
cgaggcatgatgcgactgtatcatcataaaaaactgtcccgggagcaatttgagcgttat
cggcgtcgctactccccctacggaaccactgcgtcgttctatctgtgggaaatggcgaaa
gagataccataa
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