Prodigiosinella confusarubida ATCC 39006: Ser39006_010955
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Entry
Ser39006_010955 CDS
T05290
Name
(GenBank) cyclodextrin-binding protein
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ser39006_010955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_010955
Transporters [BR:
sera02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
Ser39006_010955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Mt_ATP-synt_D
Motif
Other DBs
NCBI-ProteinID:
AUH04596
UniProt:
A0A2I5TJ66
LinkDB
All DBs
Position
2391092..2392327
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AA seq
411 aa
AA seq
DB search
MKIKKITALLLTALVAGQYSTFAAAAASRQLTVWEDIKKSVGIKQAVSDFEKQYNVKVNM
QEMPYAQQIEKLRLDGPAGIGPDVLVIPNDQLGSAVVQGLLSPLTVDKAEVAAFTSSSIH
AFTMNNRLYGIPKAVETLVLIYNKDLLPKPLATLDDYYRFSKKQRAENRYGLLAKFDQLY
YSWGVMASMGGYIFGKDSKGGLNTLDIGLNTPGSVAAVNSLKKFYTDGLFPRGIIGDSGL
NAIDSLFTEKKVAAVINGPWAFQPYADAGINYGVAPLPKLANGQSMNSFLGVKGYVVSTW
GKDKVLAQQFITFINQPEYVKTRYQLTKEIPPLVAMINDPLIKNDQRASAVAIQASLATA
MPSVPEMQEVWGPANAALQLSMTGKQAPQAALDDAVKQIKMQIEAMKASNQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaaaaaataaccgctctgctcctgaccgcactggtggcgggccaatattcc
actttcgccgctgccgcggcaagccggcaactgacggtgtgggaggacataaagaaatct
gttggcataaaacaggccgttagtgatttcgaaaaacagtacaacgtgaaagtcaatatg
caggaaatgccttatgcacaacagattgagaagctgcgtctggatggcccggcaggcatt
ggtcctgatgtgctggtgatccctaacgatcagctcggttctgcggtcgtgcaaggattg
ctctcgccactgacggtcgacaaagcggaagtcgccgccttcacgtcgtcgtccatccat
gccttcaccatgaacaaccggctgtacggtattcccaaggcggtagagacattggtgctg
atctacaacaaggatctgttgcccaagccgttggctacgctggatgactattaccgcttc
tccaaaaaacagcgggcggaaaatcgatacggtttgctggcgaaattcgatcagctttat
tacagctggggcgtcatggcgtcgatgggcggctacatctttggcaaagacagcaaaggt
ggattgaatactctggatatcggtctcaacaccccgggtagcgtggcggcggtcaacagc
ctgaaaaaattctacaccgacgggctattccccagagggatcattggtgacagtggtctt
aatgccattgattctctgtttaccgagaaaaaggtggcggcggtgatcaatgggccatgg
gcctttcagccttacgctgacgccggtatcaattatggtgttgcgccgctaccgaaactg
gccaatggccagtcgatgaactcttttctgggggtgaaaggttacgtggtgtccacctgg
ggcaaggataaggtgctggcacagcaatttattacatttatcaatcagcctgagtatgtg
aaaacccgttatcaactgaccaaagagatcccaccactggtcgcaatgattaatgacccg
ttgattaaaaatgatcagcgagccagcgccgtcgctattcaggccagtttggcgaccgcc
atgcccagcgtgcccgaaatgcaggaagtctggggcccggctaacgctgcgctgcaattg
agcatgaccggcaaacaggcacctcaggccgcgctggacgatgcggtgaaacaaatcaag
atgcaaattgaggcgatgaaagccagcaatcagtaa
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