Prodigiosinella confusarubida ATCC 39006: Ser39006_011615
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Entry
Ser39006_011615 CDS
T05290
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera02020
Two-component system
sera02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ser39006_011615 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ser39006_011615 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sera03021
]
Ser39006_011615 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sera02035
]
Ser39006_011615 (fliA)
Transcription machinery [BR:
sera03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ser39006_011615 (fliA)
Bacterial motility proteins [BR:
sera02035
]
Flagellar system
Flagellar assembly proteins
Stator
Ser39006_011615 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
tRNA_lig_CPD
TFIIE_alpha
Asp_protease
GerE
UPF0147
Motif
Other DBs
NCBI-ProteinID:
AUH04718
UniProt:
A0A2I5T753
LinkDB
All DBs
Position
2548972..2549694
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AA seq
240 aa
AA seq
DB search
MSDLYTAEGTMDKNSLWQRYIPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
SLQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVANAMRQAEQLLGRAPTEQEV
AQALDITLQEYRQILLDTNNSQLFSYDEWREEHGDSAGALLEGNEEANPLRQLMDVSVRE
RVMEAIENLPEREKLVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRVKLMNDV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatctgtataccgccgaaggcacaatggataaaaattctctctggcagcgctat
atccccttggtgcggcacgaggctctgcgattgcaggttcgtctccctgcgagcgtagaa
cttgacgatctgttgcaggcgggaggtattggtctgctcaacgcggtggagcgttatgat
tcgttgcaaggcacggcatttacgacttatgccgtacagcgtatccgtggtgcgatgtta
gacgaactccggagtcgggattgggcacctcgtagtgtgcgacgtaatgcccgtgaagtg
gctaatgctatgcgtcaggctgaacagctgctaggtagggcacccactgagcaagaagtt
gctcaggctctggatatcactctgcaagagtatcgtcagatcttgttggatactaataat
agccagctgttttcttacgatgaatggcgcgaagaacatggtgatagcgctggtgcgttg
ttggagggaaatgaagaggccaatccgctgcgtcagctcatggatgttagtgttcgtgag
agagtgatggaggcgattgaaaatttgccagagcgtgaaaagctggtgctgactctttat
taccaggaagaactgaatttgaaggaaatcggtgctgttctggatgttggggagtcacga
gttagccagttgcatagccaggcgataaagcgtctgcgtgtaaaattaatgaacgatgtt
taa
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integrated database retrieval system
