Prodigiosinella confusarubida ATCC 39006: Ser39006_011750
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Entry
Ser39006_011750 CDS
T05290
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sera03009
]
Ser39006_011750
Enzymes [BR:
sera01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Ser39006_011750
Ribosome biogenesis [BR:
sera03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Ser39006_011750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
Ub-Mut7C
Motif
Other DBs
NCBI-ProteinID:
AUH04737
UniProt:
A0A2I5TJI2
LinkDB
All DBs
Position
2580043..2580999
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AA seq
318 aa
AA seq
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MKTDNPSVQFLTISAEEAGQRIDNFLRTRLKGVPKSMIYRILRKGEVRVNKKRVKPEYKL
LDGDEIRVPPVRQSERAESTVSASLDKVSALADCIIYEDDYLLVLNKPSGTAVHGGSGLS
FGVIEALRALRPESRFLELVHRLDRDTSGVLLVAKKRSALRALHEQLRMKNMQKDYLALV
RGQWQSHCKAVQAPLFKNVLQSGERIVRVNSEGKASETHFKVEERFEHATLVKASPVTGR
THQIRVHAQYAGHPIACDDRYGDRDFDRQLAETGLKRLFLHAQALRFEHPNTGETLRLEA
PMDKELQHCLRVLRQAKK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagataatccatcagtacaatttttgacgatttctgctgaagaggcaggtcaa
cgaatagacaattttttgcgcactcgtcttaaaggtgtgccaaaaagcatgatttatcgc
attttgcgtaaaggtgaagtgcgtgtgaataagaaaagggttaagccggaatataaattg
cttgatggcgatgagatccgtgttccgcccgtacggcagtcagaacgggctgagagcact
gtttcggccagtcttgataaagtctctgcattagcagattgcataatttatgaagacgac
tatctattagtgctgaataaaccttctggtaccgctgtacatggtggcagtggcctcagc
ttcggcgttattgaggccttgcgggctctgaggccggagtcacgtttccttgaactggta
caccgactggatcgggatacgtctggtgtgttgctggtggccaagaaacgttctgcatta
cgggctcttcacgagcagttacggatgaaaaatatgcagaaggattacctggcgctggtt
cggggacaatggcaatctcattgcaaagctgtgcaggcaccactatttaagaatgttctt
caaagcggagaacgtattgtccgggtaaatagtgaaggaaaagcatcagagactcatttt
aaagtcgaagagcggttcgaacatgctacgttggtcaaagccagccccgtaacgggaagg
acacaccaaattcgggtacatgcgcaatatgctggccatcctatcgcttgtgatgaccgt
tatggtgatcgtgattttgaccgacagctggcggaaaccggattaaaacggctctttctt
catgcgcaggcgctacgctttgaacatcctaatacgggagaaacattgcggctcgaagct
ccaatggataaggaactacagcactgtctgcgggtcttgcgacaggctaaaaaatga
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