Prodigiosinella confusarubida ATCC 39006: Ser39006_011895
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Entry
Ser39006_011895 CDS
T05290
Name
(GenBank) cyclic diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Ser39006_011895
Enzymes [BR:
sera01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Ser39006_011895
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Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
CSS_CxxC
Ig_TMEM131L_5
Motif
Other DBs
NCBI-ProteinID:
AUH04764
UniProt:
A0A2I5TJL1
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All DBs
Position
complement(2609631..2611136)
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AA seq
501 aa
AA seq
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MNKLIASLTFLTMLIIGVGVIYYQDYQADYKLAVSNAEKAVNNIETVINEAQQTAELSIP
LLGRSCTPDVIRKLNMMAARESHLRTVSLIKDNVVYCSSLFGVDHRPAMLARFYKGQLAL
LAGNTVTPNTPLLMYLKTTANGSVGIGIHVPPLISVLNFLSKRRSLYMQAGYTWISVDGK
VMSFDPDNHRNFVIIPSNRYHFAVLFSSTDDYSLNDFWRQEKMTFLVILLISLSSGGLTY
KYLTQSKSPYDEIKRAIRNQEIIPFYQPVITTESREIYGFEVLARWNHPRTGIISPDVFI
PLCEQSGLIIPLTQSLMNRVIQDLSLYLDKLPDGLHIGINISAQHCQYDGFITDCQNFMD
ALGDKKIRLMVEITEREKIDITPETISFFKKLSAAGILIALDDFGTGYSNFDYLRKLQVN
IIKIDKSFVSMINREDPQASVLVNCVIDMAQKMRLVTIAEGVETEFQAEFLSSRKIDFLQ
GYLFSIPMPFAELVKTWLDKP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactaattgcttctttaacctttttaacgatgctaatcatcggggtgggggtt
atttattatcaggattatcaggctgattataaattagcggtatctaatgccgagaaagct
gtcaataatattgaaacggttattaatgaagcgcaacagacggctgaactcagcatcccc
ttgctggggcgatcctgtacccccgacgtcatcagaaagctcaatatgatggcggccaga
gagagtcatctgagaaccgtaagcctgattaaagacaatgtggtttattgttcctcgtta
tttggtgtagaccatcgcccggcgatgctggcacgtttttataaagggcaactggcgtta
ttagccggcaacacggttacaccaaatacccctttgttgatgtacctgaaaaccaccgcc
aacggtagtgtgggaataggcattcatgtccctcccctcatcagcgtacttaattttctc
agtaagcggcggagcttgtatatgcaggctggctatacctggatttccgttgacggtaaa
gtgatgtcattcgatccggataatcatcgtaattttgttatcatcccttccaaccgatat
cattttgccgttttattctcttccaccgatgactattcgcttaacgatttctggcgtcag
gaaaaaatgacatttctggttattctgctgatttcactcagttccgggggtctgacttat
aaatacttaacacaaagcaaatcaccttatgatgaaataaaaagggccattcgaaatcag
gaaatcattcctttctatcaaccggtgataaccaccgagtcacgcgaaatatatggtttt
gaggtgctggccaggtggaatcatccccgaacaggaattatatctccggacgtatttatt
ccattgtgcgaacaaagtggtctgattattcctttgacgcagtcgctaatgaaccgtgtc
atccaggatctcagtctttatctggataaactgcccgacggcttacacattggcattaat
atcagcgcacagcattgccaatacgatggttttatcaccgattgccagaatttcatggac
gcgctcggtgataaaaaaattcggttgatggttgaaattaccgaacgtgaaaaaattgat
atcaccccggaaaccatttcatttttcaaaaagctgagtgcagcaggtattttgatcgca
ctggatgactttggtaccggatattcaaattttgactatctcagaaagctacaagtaaat
atcatcaaaattgataaatcatttgtcagtatgattaatcgagaagacccgcaagccagc
gtactggtgaactgcgtcattgatatggcacagaaaatgcgattagtgactatcgccgaa
ggcgtagaaactgaatttcaggctgagttcctttccagcagaaaaattgattttctacag
ggttatctgttttcaatacccatgccttttgctgaattagtaaaaacatggctggataaa
ccgtag
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