Prodigiosinella confusarubida ATCC 39006: Ser39006_012080
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Entry
Ser39006_012080 CDS
T05290
Name
(GenBank) FAD-binding oxidoreductase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00310
Lysine degradation
sera01100
Metabolic pathways
sera01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
Ser39006_012080
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_17
Fer4_20
Fer4_18
Fer4_10
BBS7_pf
Motif
Other DBs
NCBI-ProteinID:
AUH04800
UniProt:
A0A2I5TJS4
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Position
2659830..2662883
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AA seq
1017 aa
AA seq
DB search
MIPQITQAPGLVQPVLNFLEALKQNGFTGDIATDYADRLTMATDNSIYQLLPDAVVFPRS
TADVALLARLAGDPHFLELTFTPRGGGTGTNGQALNQGVVVDMSRYMNRILEINPEQGWV
RVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLAYGKTSDHVLGL
RAILLGGDMLDTQAMPVALAEQLARENSPLGRIYHTVLHRCREQRQFIVEKFPKLNRFLT
GYDLRHVFSDDMQTFDLTRILTGAEGTLAFITEAKLDITRLPRIRRLVNVKYDSFDSALR
SAPFMVEAQALSVETVDSKVLNLAREDIVWHSVSELIADIPGQEMLGLNIVEFAGDDEAL
IDTQVNGLCQRLDTLLHHREAGIIGYQVCHDLVGIERIYAMRKKAVGLLGNSKGLAKPIP
FAEDTCVPPQHLADYIAEFRALLDSHNLTYGMFGHVDAGVLHVRPALDMCDPQQEILMKQ
LSDQIVELTAKYGGLLWGEHGKGFRAEYSPAFFGPELYDELRRIKAAFDPDNRLNPGKIC
APLGVDAPMMKVDAVKRGTYDRRIPLAVRSAFRGAMECNGNGLCFNFDARSPMCPSMKIT
GNRIHSPKGRASLVREWLRLLTEQGVDPLTLEQQLSQQRMSLRSLIHKTRNTWYARQGNY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPSFRARFLQLYHTRYLRPARDYLVAGVESYA
PLMARSPKTFNFFLKQPWLSALSRKYIGMVDLPLLSSPSLHQVFAGHQAMATTLEQLEQM
SPQMRADYVLIVQDPFTSYYDAQVVADFVRLVEKLNLKPVLLPFSPNGKAQHIKGFLQRF
AKTVTKTAEFLNRVARLDLPMVGVDPALVLCYRDEYREVLGDKRGDFQVLLVHEWLTDVL
ADKAPQPLNGDPWYLFGHCTETTALPVSSQQWSAIFARFGATLENISVGCCGMAGTYGHE
SKNLVNSQGIYSLSWQPALQRLPQQRCLTTGYSCRSQVKRMEGSGLRHPLQALLELV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacagatcacccaagcacccggacttgttcaaccggtgcttaactttttggaa
gcattgaagcaaaacgggtttacgggcgatatcgccactgactatgctgatcgcctgacg
atggcgacagataacagtatttaccagttattgccggacgcggtggtttttccccgttcg
acggcagatgtggcgttgttagcccggctggctggcgacccacatttcctggaattaacg
ttcacacctcgtggcggcggtactggcaccaatggtcaggcgctgaatcagggggttgtg
gtggacatgtcccgctatatgaaccgaattctggaaatcaatcctgagcaaggttgggta
cgcgtagaagctggggttatcaaagatcagctaaatcagtatctcaaaccattcggttat
ttctttgcaccggaactctccaccagcaatcgcgctacgctgggcggcatgattaatacc
gatgcctccggacaggggtcgttggcctacggcaaaacgtctgatcatgttcttgggttg
cgggccatattgcttggcggcgacatgctcgatacgcaggccatgccggtagcgttggcc
gaacaactggcgagagaaaattctccgctcggtcggatttatcataccgtattgcatcgt
tgtcgcgagcaacggcaatttatcgtagaaaaattccccaagctcaatagattcctgacg
ggttacgatttgcgtcatgttttcagcgatgacatgcaaacgtttgacctcacccgtatt
ctgactggggccgaaggtacactggcgtttatcactgaggcaaaactggatatcacccgt
ctacccagaatacggcggttggtgaatgtaaaatatgactctttcgattccgccttgcgt
agtgcgccctttatggtagaggcacaggcgttgtcggtggaaacggtcgattccaaagtg
ttgaatctggcacgggaagacattgtgtggcattcggtcagtgaattgattgccgatatc
cccggtcaggagatgcttggcctgaatattgtggaatttgctggtgatgacgaagcattg
attgatactcaggtcaacgggctgtgccagcgtttggatacactattgcatcaccgtgag
gcgggcattattggttatcaggtctgccacgatctcgtgggtattgaacgtatttacgcg
atgcgtaaaaaagccgttggtctgctggggaatagcaaagggttggcaaagccaattccg
tttgcggaagatacctgtgttccaccgcagcatctggcggattatattgcggaattccgt
gctttgctggacagccataacctgacttatggcatgtttggccatgttgatgctggcgtg
ttacatgttcgtcccgcattggatatgtgcgatccgcagcaggagatcctgatgaagcag
ctttctgaccagattgtcgaactgacggcaaaatatggcggtttgttgtggggggaacat
ggcaaaggattccgtgccgaatacagtccggcgttctttggcccggaattgtatgatgag
ttgcgccgaataaaagccgcgtttgatccggataaccggttaaatcccgggaaaatctgt
gcgcccctgggtgttgacgcgccgatgatgaaagtggatgcggttaaacgtgggacttat
gaccggcgtattccactggcggtgcgtagtgcgtttcgtggggccatggaatgtaatggc
aatgggctttgtttcaatttcgacgcccgtagcccaatgtgtccatcaatgaaaattacc
ggtaaccgtattcactcaccgaaaggtcgggcctcgttggtacgggaatggttgcgcctg
ctgactgagcagggcgttgaccctttgaccctggaacagcagttatcgcagcagcggatg
agcctgcggagcttgattcataaaacccgtaacacctggtatgcccgtcagggaaattat
gatttctcccatgaggtaaaagaggcgatgtcgggatgtctggcctgtaaggcctgctcg
acccaatgcccgatcaagattgacgttcccagttttcgggcacgttttctacagctttac
catactcgctatctgcgtccggccagagattatctggttgcgggggtggaaagttatgcg
ccattaatggcccgtagtcccaagacatttaattttttcctgaaacagccgtggcttagt
gccttaagccgtaagtatatcggaatggtcgatttaccactgctttcgtcgccctcattg
catcaggtatttgccgggcaccaggcaatggcaaccacgctggaacaactagaacagatg
tcgccgcagatgcgggccgactatgtgctgattgtacaggatcccttcaccagttattac
gatgcgcaggtagtggcagattttgtccgtctggtggaaaaactgaatctgaagccggtc
ttgctgccgttttccccgaacggtaaagcacagcatatcaaagggttcttgcagcgtttt
gctaaaacagtcacgaaaaccgcagagtttcttaatcgggttgcccgcctggatttgccc
atggttggtgtcgatccggcgctggttttatgttaccgggatgaatatcgggaagtgtta
ggagataaacgtggtgattttcaggtgttgctggttcatgaatggttaacggatgttctg
gctgataaagcgccccagcccttgaacggtgatccttggtatctgtttggtcactgtacg
gaaacaacggcgttgcctgttagttcacagcaatggtcggctattttcgcccgctttggc
gcgacgttggagaatataagtgtcgggtgttgtggcatggcgggaacctatggtcatgag
agcaaaaatctggtcaattctcagggaatttatagcttgtcatggcaaccggctttgcaa
cgactacctcagcagcgttgtcttaccacaggatactcctgtcgcagtcaagtgaaacgg
atggagggcagcggtttgcggcatcctttacaagcattgttggagttagtgtga
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