Prodigiosinella confusarubida ATCC 39006: Ser39006_012120
Help
Entry
Ser39006_012120 CDS
T05290
Name
(GenBank) L,D-transpeptidase
KO
K19236
L,D-transpeptidase YcfS
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Ser39006_012120
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sera01002
]
Ser39006_012120
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sera01011
]
Ser39006_012120
Peptidases and inhibitors [BR:
sera01002
]
Cysteine peptidases
Family C82
Ser39006_012120
Peptidoglycan biosynthesis and degradation proteins [BR:
sera01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Ser39006_012120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AUH04808
UniProt:
A0A2I5TJR7
LinkDB
All DBs
Position
2670091..2671089
Genome browser
AA seq
332 aa
AA seq
DB search
MKHAFKLLTLFFVSSLVGISVAWATEYPLPPPGSRLIGENIIYTVPNDGRPLEAIAADYK
IGLLGMLEANPGTDPYLPKAGTTLIIPTQMLLPDAPREGIIINLAELRLYYYPKGKDTVI
VYPIGIGQLGRSTPVMVTRIREKHENPTWTPTPNIRKRYKEDGIILPAVVPAGPDNPMGL
FALRLAKSGGVYLIHGTNANFGIGMRVSSGCIRLRPDDIKALFNAVPVGTQVRVINEPIK
VAVEPDGKRYMEVHQPLSRSDKDDPQTMPIALSKDVKTFIRNKDTDAGSVSATIARRSGM
PVLVNVGQQIHDFQLPQTTGAAAPISAISPSR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgcttttaaattattaactctattctttgtgtcgtccctggtgggtatctca
gtggcgtgggcgacagaatatccacttccaccaccaggaagccgtttgattggcgaaaat
attatttataccgtacccaacgatggccgccctctggaagcaattgctgctgattataag
attgggttgcttgggatgttggaggcgaatccgggaacggacccttatttgccgaaggcg
ggaaccacattgataattccgacacagatgctgctgccggacgcgccgcgtgaaggtatc
attatcaatctggctgagttgcgcttgtactattatcccaagggcaaggatacggtaatt
gtttatcctatcggcattggtcagttagggcgcagtaccccagttatggtcacccggatc
agagaaaaacatgagaatcctacctggacaccaacgccgaacattcgtaagcgctataaa
gaagatggcatcattttaccggcagtagtcccagctggtccggacaatccgatgggatta
tttgccttacggttggctaaaagtggcggggtttatcttatccatggaaccaatgccaat
tttggcattggtatgcgtgtcagttctggttgtatccgtttacgtcctgatgatatcaag
gcattgtttaatgctgtaccagtaggaactcaggtgcgggttatcaacgaacctatcaag
gtggcggtagaaccggatggtaagcgctatatggaggtacatcagccactgtccagatcg
gataaagatgacccacaaaccatgccgattgctcttagcaaggacgtgaagacgtttatt
cgcaacaaggataccgatgcaggcagtgtctctgccacgattgctcgtcgttctggtatg
cccgtattggttaatgttggacagcagattcacgactttcagttaccgcagacgacaggc
gctgctgcacctatttctgccatcagtccatcacggtaa
DBGET
integrated database retrieval system
