Prodigiosinella confusarubida ATCC 39006: Ser39006_012480
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Entry
Ser39006_012480 CDS
T05290
Name
(GenBank) oligopeptide ABC transporter substrate-binding protein OppA
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera01501
beta-Lactam resistance
sera02010
ABC transporters
sera02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ser39006_012480
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ser39006_012480
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ser39006_012480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_012480
Transporters [BR:
sera02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
Ser39006_012480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AUH04873
UniProt:
A0A2I5T7Q9
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All DBs
Position
2761013..2762629
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AA seq
538 aa
AA seq
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MLFRYSILCGGLFTALMSSVSAAQVPPGTILAEKQEIVRHIKDEPASLDPIKAVGLPEAQ
VIRDLYEGLVNQDAYGNLIPGVALRWQTNDNRTFIFTLRDNARWSNGDPVTAKDFVYSWR
RLVTPKNASPFGWFARLAGILNADEILAGKLPAEKLGVIAMDDHTLKVQLNKPVPYFVSL
VANFSLYPVHQATLEKYGNDWTKPGNLVGNGAFKLQDRVVNEKLVLVPNDDYWDHAHTCL
TKVTFVPINSESSATKRYLAGDIDITESFPKNMYRKLMKELPGQVFTPDQLGTYYYAFNT
QRAPTNDPRVRKALSYAIDRQVIAEKVLGTGEKPAYHFTPDVTAGFKPAPVELQQYSQEE
LDAQAKALMAIAGYGPGKPLKLSLLYNTQEVHKKIAIAIASMWKKKLGVNVKLVNQEWQT
YIDSRNTGNFDVVRASWVGDYNEPSTFLSLLTSNHSGNIARFKNADYDRVLEDAAGQTDA
KMLNDDYNKAEQILADQSPIAPIYQYTNGRLIKPWVKGYPITNPEDVAYSQTLYILKH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgttatttcgttattccatcctgtgtggcgggttatttacagcgttaatgagcagcgtc
agtgccgcacaagtgcctccgggaaccatactggctgaaaagcaggaaattgttcgtcat
atcaaggacgaacctgcctcactggatccgataaaagcggtgggattgccggaagcgcag
gttattcgtgacctgtatgaaggcctggtcaatcaggatgcgtatggcaatctgatcccc
ggcgtggcgctacgttggcaaaccaatgataaccgtacgtttatttttacattgcgtgac
aatgcccgttggtccaatggtgatccggtaacggccaaagactttgtgtacagttggcgc
cgtctggttacaccgaaaaatgcttcaccatttggttggtttgcccgtttggctggcatt
ctcaatgccgatgagattctggcgggtaaactaccggccgagaaactgggcgtgatcgca
atggatgaccacactctcaaagtacaactgaataaacccgtaccctattttgtcagcctg
gtagctaacttcagtctttatccggtacatcaggccacgttggaaaaatacggtaacgac
tggaccaaacccggtaatttagtgggcaatggtgcgtttaaactgcaagacagggtggtg
aatgaaaagctggtgctggtgccgaatgatgactattgggatcatgcccatacctgtctg
accaaagttactttcgtaccgattaacagtgaatcgagcgcgactaaacgctatctggct
ggagatatcgatatcacggagtcgttccccaagaacatgtaccgaaagctgatgaaagag
ttaccaggtcaggtttttacgccggatcaactgggaacgtattattacgccttcaatacc
cagcgcgctccgacgaatgatccgcgggtacgcaaagcgctgtcgtatgctattgaccgg
caggttattgcggaaaaggttttgggaaccggagaaaaacctgcttatcactttacgccg
gatgtgacggcagggttcaagcctgcacccgtggaattgcagcaatattcacaagaagag
ctggatgctcaggccaaggcactgatggcgattgccggttatggtcccggaaaaccattg
aagttgtcgttactgtacaacacacaggaagtgcataagaagattgctatcgccatcgcc
tcaatgtggaaaaagaaactgggtgtgaacgtgaagctggtcaatcaggagtggcagacc
tacatcgatagccgtaatacgggaaattttgatgtagtacgggcgtcctgggtaggggat
tacaatgagccttcaacattcttgtctctgttaacgtcgaatcacagcggtaatatcgct
cgtttcaaaaatgcggattatgaccgggtgcttgaagacgccgcgggacagaccgatgcc
aagatgctgaatgacgactacaacaaagccgaacagatactggcggaccagtccccgatt
gcaccgatctatcaatataccaacggacggttgatcaagccgtgggtaaaagggtacccg
attaccaatccggaagatgtggcatacagtcaaacactctatattctcaaacattag
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