Prodigiosinella confusarubida ATCC 39006: Ser39006_012700
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Entry
Ser39006_012700 CDS
T05290
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00250
Alanine, aspartate and glutamate metabolism
sera00310
Lysine degradation
sera00350
Tyrosine metabolism
sera00650
Butanoate metabolism
sera00760
Nicotinate and nicotinamide metabolism
sera01100
Metabolic pathways
sera01120
Microbial metabolism in diverse environments
Module
sera_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Ser39006_012700 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Ser39006_012700 (gabD)
00310 Lysine degradation
Ser39006_012700 (gabD)
00350 Tyrosine metabolism
Ser39006_012700 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
Ser39006_012700 (gabD)
Enzymes [BR:
sera01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
Ser39006_012700 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
Ser39006_012700 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
Ser39006_012700 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AUH04915
UniProt:
A0A2I5T7S7
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All DBs
Position
2816435..2817895
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AA seq
486 aa
AA seq
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MQLKNNILFRQQCLIGGEWLDSQSGENLVVNNPATGETLGTVPLVTADQTRQAIDAAEQA
LTPWRLRTGKERAALLQAWARLIRENQDDLAALLTAEQGKPLPEALGEIGYATSFIDWFA
EEAKRVEGSVLQSPQATQRLLVIKQAIGVCAAITPWNFPAAMITRKVAPALAAGCTMIVK
PAEQTPFTALALAELAQQAGIPAGVLQVVTGDAPSVGKILCDSPVVRKLSFTGSTEVGRI
LMAQSAPTVKKLSLELGGNAPFIVFDDADLELAVKGILASKFRNSGQTCVCANRIYVQRG
IYPALAARLVEEVKKLKVGEGTQPGVTQGPLIDDDAVSKVQQHIDDALSQGATLLVGGEP
HALGGTFFSPTVIGDVTRTMRFAREETFGPVAPLFPFSEEAEVVTMANDTEFGLAAYVYT
RDAIRQWRVPEALDYGMVGINTGLISNEVAPFGGVKQSGLGREGSRFGIEDYLEMKYLCV
DLTPSV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaaaaataatattttattccgccagcaatgtctgattggcggtgagtggctg
gatagccagagcggtgaaaatctggttgtgaacaatccggcgacgggtgaaacgttggga
actgtaccgctggtgactgccgatcaaacccgtcaggcgattgacgcggcggagcaggcg
ctgactccgtggcgtttgcgtactggaaaagaacgtgcggcgctgttacaggcatgggca
cggctgattcgtgaaaatcaggatgatttagctgcgttacttactgctgaacagggaaaa
ccgctgcctgaagcgttgggggaaatcggttatgccacgtcgtttatcgattggtttgcc
gaagaagccaaacgagttgaaggcagtgtgttgcagtcaccacaggccacccagcgtctg
ttggtaattaaacaggcgatcggggtgtgcgcggcgattacgccgtggaacttcccggcc
gcgatgattacccgcaaggtcgcgccggcactggcggcaggctgtaccatgattgttaaa
ccggcagagcagacaccgtttacggcactggcgttggcggaattggcacaacaggctggc
attcctgccggagtattgcaggtggtgaccggtgacgcgccttcggtagggaaaatcctg
tgcgatagcccggtggttcgcaagttgagtttcaccggctcaaccgaggtcgggcgtatt
ctgatggcgcaaagcgcaccaacagtgaaaaaattatcactggaactgggcggcaatgcg
ccgtttatcgtgttcgacgatgcagatctggaactggcggtgaaaggtattttggcgtcc
aagtttcgtaacagcggtcaaacgtgtgtttgtgccaaccggatttatgtccagcgcggt
atttacccggcactggcggcacggctggtagaggaagtgaagaagcttaaggtgggagaa
ggtactcaacccggtgttacacaaggcccgttgattgatgacgatgcggtcagcaaggtg
cagcaacacattgatgacgcgctgtcgcaaggggcaaccttgttggtggggggagaacct
catgcgctgggcggtacgttcttctctccaacggtgattggcgatgtaacgcgcactatg
cgttttgcccgcgaagaaacctttggcccggtcgcgccgctgtttccgttcagtgaagag
gctgaagttgtcaccatggccaatgacacggagttcggtctggctgcctatgtttatacc
cgggatgccattcgtcaatggcgagtacccgaagcgcttgattacggcatggtaggtatc
aacactggcctgatttcgaacgaagtggctccatttggcggtgtgaaacagtcaggtttg
ggccgtgaaggttcacggttcggtatcgaggattatctggagatgaaatatctctgtgta
gacctcacgccttcagtttga
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