Prodigiosinella confusarubida ATCC 39006: Ser39006_013425
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Entry
Ser39006_013425 CDS
T05290
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ser39006_013425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_013425
Transporters [BR:
sera02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Ser39006_013425
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Lipoprotein_10
Motif
Other DBs
NCBI-ProteinID:
AUH06845
UniProt:
A0A2I5TDA5
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All DBs
Position
2970616..2971650
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AA seq
344 aa
AA seq
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MRWDEVVAEARKEGQLNWFNWYFQDRFRQQVKAFELEYGVKVTIPDGSLQANINKLLAEK
NRTQGDIDVLSIGADQLDSFDVTKLFWGPLQNRLPDSEKLRFKMAGVDSHGYAVAFWGNQ
SVIAYNSARLNEADVPRTLDQFERFIQKNPGELAFNVENGGSGPAFIEAITRKLVPDVNY
RQGDASPDVLRRLAPAWAWFNKYKGDYVITASNADSITRLNAGEFEISPSWEDFVLGLQH
QGEISRDIKFYIPDFGMPGGGNVVAIPANAKHKAAALVFIYWLTRSDTQAHFHQVFGSAP
QSKDMNNNISHPSTGLDRAKSLVWAKKPLGDEIRKQFVDNVLMK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgggatgaggtggtggctgaagcgcgtaaagaagggcaacttaactggtttaac
tggtattttcaggatcgtttccgacagcaagtgaaagcgtttgaattggaatacggggtt
aaagtcacgattccggatggtagtttacaggccaatattaataaattattggcggaaaag
aaccggactcagggcgatatcgatgtgctttccattggtgcggatcagcttgattctttt
gatgtgacgaaattgttctggggtccattgcagaaccggctccccgatagcgaaaagctt
cgtttcaagatggcgggggtggattcgcatggctacgccgtcgcattttggggaaatcaa
tcggttatagcttataactcggctcgattaaacgaggctgatgtgccacgaacactggat
cagtttgaacgctttatccagaaaaaccctggcgaactggcctttaatgtggagaacggt
ggatccggaccggcatttattgaagcgattacccgcaaactggtgcctgatgtgaattat
cgccagggtgatgcctcgccagatgtattgcgtcgtctggctccggcctgggcatggttc
aacaaatataaaggcgattacgtgattaccgcctctaatgctgacagcatcacccgcctc
aatgcaggtgaattcgaaatatccccttcctgggaagattttgtgctcgggttacagcat
caaggtgaaatttcacgggacatcaaattttatattcctgattttggcatgcccggtggc
ggcaacgtggtggctatcccggcgaatgccaaacataaagcggccgcgctggtctttatc
tattggttgacccgcagcgacactcaggcgcatttccatcaggtatttggctctgctcca
cagtcgaaggatatgaataacaacattagtcatccttccactggacttgatcgcgccaag
tcgcttgtctgggcaaaaaagccacttggggatgagataagaaaacagtttgtcgacaat
gtattgatgaaataa
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