Prodigiosinella confusarubida ATCC 39006: Ser39006_013925
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Entry
Ser39006_013925 CDS
T05290
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein OppF
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera01501
beta-Lactam resistance
sera02010
ABC transporters
sera02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ser39006_013925
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ser39006_013925
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ser39006_013925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_013925
Transporters [BR:
sera02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
Ser39006_013925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
nSTAND1
SMC_N
ATP-synt_ab
RsgA_GTPase
AAA_29
NB-ARC
AAA
NACHT
nSTAND3
AAA_13
MobB
NPHP3_N
DUF5906
MMR_HSR1
RNA_helicase
AAA_23
PRK
FAA_hydrolase_N
Sigma54_activat
AAA_16
DUF87
Motif
Other DBs
NCBI-ProteinID:
AUH05130
UniProt:
A0A2I5T8A2
LinkDB
All DBs
Position
complement(3092271..3093278)
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AA seq
335 aa
AA seq
DB search
MSLMDDKKILLEVDELKVHFDVRDEKQWFWQPPMRLKAVDGVTLRLYQGETLGIVGESGC
GKSTLARAIIGLVKATGGSITWMGNDLLGMGNTQWREVRNDIQMIFQDPLASLNPRMTIG
EIIAEPLRTYHPKLSRQNVKDRVKTIMMKVGLLPNLINRYPHEFSGGQCQRIGIARALIL
EPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLSVVKHISDRVLVMYLG
HAVELGTYDELYHNPLHPYTRALMSAVPIPDPDKERNKQIQLLEGDLPSPINPPTGCVFC
TRCPIAGPECVKTRPVLEGSFRHAVSCLKVDPLPQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgatggacgataaaaaaatcctgcttgaagtggacgagctgaaagttcatttt
gatgtccgggatgaaaagcagtggttctggcagccgccaatgcgcttgaaagcagtcgat
ggcgtcactctgcgattgtatcaaggtgaaacgctggggatcgttggagagtccggttgt
ggcaaatccacactggcccgcgccattatcggtctggtgaaagccaccggtggcagtatt
acctggatgggtaacgatttattggggatgggaaatacacagtggcgggaagtgcgcaac
gatatccagatgatatttcaggatccgctggcttcgctgaacccacggatgaccatcggg
gaaattattgctgaaccactgcgtacctatcatccgaagttatcccgccagaacgtcaag
gatcgggttaagacgataatgatgaaagtggggttgttgccaaacctgatcaaccgttat
ccgcatgagttttccggtggacagtgtcagcgaatcgggatcgcccgagcgctgattctg
gagccaaaactgatcatttgcgacgaacccgtgtcggcgctggacgtatcaattcaggca
caggtagtgaatctgttgcagcagttgcagcgtgaaatgggattatcattgatctttatt
gcgcatgatttatctgtggttaaacatatctctgaccgggtgttggtcatgtatctgggc
catgcggtagaactgggcacttatgatgagctgtaccataatccactgcacccttacact
cgggcgttaatgtcggcggtaccgattccagatccggataaagagcggaataagcagatt
cagttgctggaaggtgaccttccttcacccattaacccaccgactggatgtgtgttctgt
acccgctgcccgattgccggaccggagtgtgttaaaacacgccccgtgctggagggtagt
tttcgccatgcggtttcatgtttgaaagtcgaccctctgccacaatga
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