Prodigiosinella confusarubida ATCC 39006: Ser39006_014405
Help
Entry
Ser39006_014405 CDS
T05290
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Ser39006_014405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sera03400
]
Ser39006_014405
DNA repair and recombination proteins [BR:
sera03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Ser39006_014405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AUH05216
UniProt:
A0A2I5T8L9
LinkDB
All DBs
Position
3177506..3178168
Genome browser
AA seq
220 aa
AA seq
DB search
MLRVIDTETTSFEGGIVEIASVDIVDGVICNPMSDLVCPPEAISFEAMAIHHITEDMVES
APLISEVIGRYLGADAYVAHNAAFDKAKLPQIDSPWICTMKLARKLFPEHASHSNQYLRY
SLGLKPELPEGLYAHRALYDCYVTAELLIYMGRMAQWTMREMREITNNPSLLHAMRFGKH
KGKTFAELSKGDPGYLRWLIASDMDEDIKYTARHWLNGGI
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttacgagtcattgatacggaaaccaccagttttgagggtggcatcgtcgagattgcc
agtgtcgacattgttgatggcgtcatttgtaatcctatgagcgatctggtttgtccgcct
gaggctatcagttttgaagcaatggcgattcaccatatcactgaggatatggttgaaagc
gcgccactaattagcgaggttattggtcgctatttgggggccgatgcgtacgttgctcat
aatgcggcgtttgataaagcaaaactgccacaaattgattccccatggatttgcacaatg
aagctggcacggaaactattcccggaacatgccagccacagcaaccagtacctgcgttac
agcctgggacttaagcccgaattaccggaaggtctctacgcccaccgcgcactatatgac
tgttatgtcaccgctgaattgctcatctatatggggcgcatggcgcaatggactatgagg
gaaatgcgggaaataacaaacaacccgtccctgctccacgccatgcgcttcggcaagcat
aaagggaaaacctttgcggaactgtcaaaaggggatcccgggtatctgcgctggttgatt
gccagtgacatggatgaagacatcaaatacacggccaggcattggcttaacgggggcatc
taa
DBGET
integrated database retrieval system
