Prodigiosinella confusarubida ATCC 39006: Ser39006_014655
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Entry
Ser39006_014655 CDS
T05290
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ser39006_014655
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sera01007
]
Ser39006_014655
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sera03016
]
Ser39006_014655
Enzymes [BR:
sera01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Ser39006_014655
Amino acid related enzymes [BR:
sera01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Ser39006_014655
Transfer RNA biogenesis [BR:
sera03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Ser39006_014655
Prokaryotic type
Ser39006_014655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AUH05261
UniProt:
A0A2I5T8P1
LinkDB
All DBs
Position
complement(3223009..3225396)
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AA seq
795 aa
AA seq
DB search
MKFSELWLREWVNPAISSDALSEQITMAGLEVDGVEAVAGAFHGVVVGEVMECAQHPNAD
KLRVTKVNVGGERLLNIVCGAPNCRQGLKVAVATVGAVLPGDFKIKAAKLRGEPSEGMLC
SFSELAITDDHSGIIELPLDAPVGSDIRDYLALNDHTIEISVTPNRADCLGILGVARDVA
VLNALALTEPEIVPVDVVIQDTFPISVEATQACPRYLGRVVKGINIKATTPLWMSEKLRR
CGIRSIDPVVDVTNYVLLELGQPMHAFDLSRLDGGIVVRMAKDGEVLRLLDGSDATLNSD
TLVIADHQKALAIGGIFGGEHSGVNEDTQDVLLECAYFNPLSITGRARRYGLHTDASHRY
ERGVDPALQHKAIERATRLLLDICGGNAGPVIDVTSEKDLPVRATIELRREKLDRLIGHH
IVDEKVSTILSHLGCQVTKTNAGWQAVAPSWRFDMEIEEDLVEEVARIYGYDNIPNVATL
APLTMTQHREADLSLKRVKTMLVDRGFQEAITYSFVDPKIQSLVHPDEEALILPSPISVE
MSAMRLSLWSGLLEAIVYNQNRQQSRLRLFESGLRFVPDQSADLGIRQDMMLAGVITGTR
YEEHWDLTRQAVDFYDLKGDLEAILALTGKQSAIEFRAEANPALHPGQSAAIYLGEERIG
FIGVIHPELERKLDLNGRTVVFEVCWDRLADRVVPDAKDISRFPSNRRDIAVVVSENVLA
GDVLTECKKVGANQLVGVNLFDVYRGKGVAEGYKSLAISLILQDTSRTLAEEEIAATVAQ
CVAALKQRFQASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaactctggttacgcgaatgggttaatccagcaatcagcagcgatgcc
ttatctgaacaaattactatggcgggtcttgaagtcgatggcgttgaagctgttgctggt
gccttccatggtgttgttgtaggggaagtgatggagtgcgcacagcaccctaatgcggat
aagttgcgtgtaacaaaggttaatgttggaggtgagcgcctgctgaatatcgtttgtggc
gcaccgaattgtcgtcagggcttgaaagttgcagtcgcaaccgtgggggctgttcttccc
ggcgattttaaaatcaaagcggcaaaattgcgtggtgaaccttcggaagggatgttgtgt
tcattttcggagttggctattaccgatgatcacagtggtatcattgagttaccactggat
gccccagtaggtagcgatatccgtgactatttagcgctcaatgaccacactatcgaaatc
agtgtgacaccgaaccgtgcggattgcctgggcatcctgggggttgcacgtgatgtggcc
gtattgaatgcgttggcgttgactgaaccggaaattgtaccggttgatgtcgttattcag
gatacgtttccgattagcgttgaggcgactcaagcttgtccgcgttatctgggccgggta
gtgaagggcattaatattaaggcgacaacaccgctgtggatgagtgaaaaactgcgacgc
tgcggtattcgttctatcgatccggtggtggatgttaccaactatgttttgttggaactg
ggacaacccatgcatgccttcgatctgagccgtctggacggaggtattgtcgtgcgtatg
gccaaagacggcgaagttctgcgcctgctggatggtagtgatgccacattgaacagtgac
acactggtgattgcggaccaccaaaaggctctggctataggtggaattttcggtggggaa
cactcgggtgtaaatgaggacacacaggatgtgttgctggagtgtgcttacttcaacccg
ctgtctatcactggtcgtgcccgtcgttatggtctgcacacggatgcgtcccatcgctat
gagcgtggtgttgacccggccttgcaacataaggctatcgagcgtgctacccgtttactt
ttggatatctgtggcggcaatgccgggccggtcattgatgttactagcgaaaaagactta
cctgttcgagccaccattgaactgcgccgagaaaagctggatcggttgattggtcatcat
attgtcgatgaaaaagtcagcactatcctgagccatctgggctgtcaggtaacgaaaacc
aatgctggatggcaggcggtagcaccaagttggcgtttcgatatggaaatcgaagaggac
ctggtggaagaagtcgcacgcatatatggctatgacaatattcccaatgtggcgacgctg
gcaccactgacaatgactcagcatcgtgaagcggatttgtcgctcaaacgagtgaaaacc
atgttggttgaccgtggtttccaggaagcaattacttacagttttgttgatcccaaaatt
cagtctctggttcatccagatgaagaggctttgattctgcctagtccgatttcggttgaa
atgtccgcgatgagactctcactgtggagcggtttactggaagcgatagtctataatcag
aaccgtcagcaaagccgtctacgcctgtttgaaagcggtttacgctttgttccggatcaa
agtgcagacctgggcattcgtcaggatatgatgctggcaggggtgattactggaacgcgg
tatgaagagcactgggatctgacccgtcaggctgttgatttctatgatttgaaaggtgat
ctggaagctattctggcattgacaggtaagcagtcagccattgaatttcgcgctgaggcg
aacccggcattacatccagggcaaagtgctgcaatttatttaggtgaagaacgcattggt
tttattggtgtcattcatcctgagctggaacgtaaactggatctgaatgggcgtactgta
gtgtttgaagtctgctgggatcggcttgcagaccgcgtggtgcctgatgcgaaggacatt
tcacgcttcccgtctaatcgtcgcgacatcgctgtggtcgtctctgaaaacgtgctcgca
ggcgatgttttaaccgaatgcaagaaagttggcgcaaatcagttagttggcgtaaactta
tttgacgtgtaccgaggaaagggcgtagcggaagggtataagagcctggctattagcctg
atattgcaggatacctctcgtacactggcagaagaggaaattgccgctacggttgcgcaa
tgtgtggcggcattaaaacagcgattccaagcatccttgagggattga
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