Prodigiosinella confusarubida ATCC 39006: Ser39006_015210
Help
Entry
Ser39006_015210 CDS
T05290
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sera03000
]
Ser39006_015210
Transcription factors [BR:
sera03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ser39006_015210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MarR
Penicillinase_R
PA-IIL
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AUH05363
UniProt:
A0A2I5TLC1
LinkDB
All DBs
Position
3330417..3331286
Genome browser
AA seq
289 aa
AA seq
DB search
MNMLEKIQSYLELLSKSERKVAEVILASPQTAIHSSIATLAGVAEVSEPTVNRFCRRLET
KGFPDFKLHLAQSLANGTPYVNRNVEEDDTVEAYTSKIFESTMAGLEHVKSCLDIAAINR
AVDLLTQAKKISFFGFGASAAVAHDAMNKFFRFNIPVVYFDDLVMQRMGCMNSGEGDVVV
LISHTGRTKSLVEMAHLARENDATVIAITSDDTPLSREASLTLRVEVPEDTDVYMPMVSR
IAQLTLIDVLATGFTLRRGAKFRDNLKRVKEALRESRFDKEERFSKPFG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctggaaaaaatccagagctatctggagctgctgagtaaatctgaacgaaaa
gtggctgaagtcatcctcgcatcaccccagacagccattcattccagtatcgccacactg
gccggtgtggctgaagtcagtgaacccacggtcaatcgattctgtcgccgccttgagacc
aagggtttccctgattttaaactacatctggcccaaagtctggctaatggcacaccttat
gtgaaccgcaatgtagaagaagatgatacggtggaggcctacaccagtaagatctttgaa
tccaccatggcgggattggaacacgtgaaatcctgtctggatattgctgccatcaatcgc
gccgtggatctgctcacgcaagccaagaagatctctttcttcgggtttggtgcgtcggcg
gccgtcgctcacgatgccatgaataaatttttccgttttaatattccggtggtttacttt
gatgatctggtgatgcagcgtatgggctgcatgaactcgggtgaaggcgatgtggtggtg
ttgatttcgcacaccggccgcacgaaaagcctggtggaaatggcacatctggcccgtgaa
aacgatgccaccgttatcgccattacctcagacgatacaccgctgtccagggaagcctca
ctcactctacgcgtggaagtaccggaagatactgatgtctatatgccaatggtatcgcga
attgcccagcttacattgattgatgtgctggccaccggatttaccttgcgtcgcggcgca
aaattccgggataacttgaagcgtgtcaaggaagcattacgagaatcgcgttttgataag
gaagaacgattcagcaaaccctttggttaa
DBGET
integrated database retrieval system
