Prodigiosinella confusarubida ATCC 39006: Ser39006_015750
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Entry
Ser39006_015750 CDS
T05290
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sera03009
]
Ser39006_015750
Ribosome biogenesis [BR:
sera03009
]
Prokaryotic type
ribosomal protein modification factors
Ser39006_015750
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AUH05461
UniProt:
A0A2I5T985
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Position
3442858..3444621
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQQLLNLGFNIEEASWLNPVPNVWSVHIRDRDCALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFYLGKEIAEGDFVHYPDEKWFVLPEDDTLPDG
ILDARLRAFYDPEHELAASDLIDLQSGNAARGICALPFTRQSDQQTIYIPMNIIGNLYVS
NGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPSAVLARYPTVIEAIAALEKE
GFPIFAYDASLGGQYPVICVVLFNPDNGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDSDEVAEHTNLETHFIDSSGLISWDMFRQKADYAFADWDFSGTTEQEFATLM
SIFRKENKEVYIADYEHLAVYACRILVPGMSDIYPAEDLWLANSSMGAHLRDTLLTLPDS
QWEPQNYLELLQQLDDEGLDDFTRVRELLGIASGKDNGWFTLRIGELKAMLALAGGDLDL
ALSWVEWSQDFNQSVFSAERSNYYRCLRTLLQLALEPERDPAQYYDAFVKMYGQDTVDVA
SAAIAGEQCFHGLFAIDAELKALPAHQSLLAAYEKLQQVKRKHWQKQ
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacgtttatcccaggcaaagacgccgccctggaagattccatcgcccgtttt
caacaacagctcctcaatctggggtttaacatcgaagaagcctcgtggctgaatccggtt
cctaatgtttggtcagtacatatccgtgatcgcgactgcgcgttgtgcttcaccaatggt
aaaggcgcgacgaaaaaggcagcattggcctccgcgctgggtgagtattttgagcgcctg
tctaccaactatttttttgctgatttctatctgggcaaggagattgccgaaggcgatttc
gtgcactatccagatgaaaaatggtttgtgctgccggaagatgacacgctgccggacggt
attctggatgcgcgcctgcgcgccttttacgatcccgagcatgaactggcagccagcgac
ctgatcgacctgcaatccggtaacgccgcccgcggcatctgcgcgctgccctttacccgt
cagtccgatcagcaaacgatttatattccgatgaacatcatcggtaatctgtatgtttcc
aacggcatgtctgccggcaataccgccaatgaggcccgggttcaggcgctttccgaagtt
tttgagcgttatgtgaaaaaccggattattgcggagtctatcagtttgccggaaattcca
tctgcggttctggctcgctatcccaccgtgattgaagcgattgccgcactggaaaaagaa
ggcttcccgatttttgcctatgacgcttctcttggcggtcagtatccggtcatttgtgtc
gtactgtttaaccccgataacggtacctgtttcgcctctttcggcgcacacccggatttt
ggcgtggcactggaacgtaccgtaaccgaactgttgcaagggcggagtctgaaagattta
gacgtatttacgccccctacttttgatagcgacgaagtcgcagaacacactaatctggaa
acccattttatcgattccagcggtctgatttcctgggacatgttccgacaaaaagccgac
tatgcttttgctgactgggatttcagtggcacgaccgagcaggaatttgccacgctgatg
tccattttccgcaaggaaaataaagaagtgtatatcgccgactacgagcatcttgctgtg
tatgcctgccgaatcctggtgccaggtatgtctgacatttacccggccgaagatctatgg
ctggccaacagcagcatgggcgcacatctgcgggataccttgctgacattgcctgacagc
cagtgggaaccacagaattatctggaattactgcaacaactggatgatgaagggctggac
gatttcactcgggtacgtgagctgctgggtattgcctccggcaaagataacggctggttc
acattgcgcattggtgaactgaaagccatgctcgcgctcgcgggtggcgatctggatctg
gcgctgagttgggtcgaatggtcgcaggacttcaatcagtctgtcttcagtgccgaacgc
agcaattattaccgttgtttgcgcacactgctgcaactggcactcgaaccagaacgcgac
ccggcacagtattatgatgctttcgtaaaaatgtacgggcaggatacggtagatgtcgcc
agcgcagccatcgccggagaacagtgtttccatgggttgtttgcgatagatgccgagctg
aaggcgttgcctgcgcatcagtcactgctggccgcctacgaaaagctacagcaggttaaa
cgtaagcattggcaaaagcagtag
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