Prodigiosinella confusarubida ATCC 39006: Ser39006_016015
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Entry
Ser39006_016015 CDS
T05290
Name
(GenBank) alpha/beta hydrolase
KO
K18100
rhamnosyltransferase subunit A [EC:2.4.1.-]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ser39006_016015
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sera01003
]
Ser39006_016015
Glycosyltransferases [BR:
sera01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Ser39006_016015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
BAAT_C
Abhydrolase_4
Abhydrolase_11
IL2
Motif
Other DBs
NCBI-ProteinID:
AUH05505
UniProt:
A0A2I5T9G2
LinkDB
All DBs
Position
3509077..3509895
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AA seq
272 aa
AA seq
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MAIEKSIVNYKSWNVYVEKHISNPDNETVIMVNGALSTTAAFKNTVKNLSGKFNIILFDL
PFLGESLEHNDLSHVITKDDEVNILLNLIEVLEPQYIISISWGGLSSLLALSKKPGQIKK
AVIASFSANLNDKMRNYVERARTCIHSKRFEDAAILLNEEVGKFLPPLLKHINLKHLSAL
DEFAFQQVSFHIDQVLTLKEENYIDIFKNINAEVLFLNGEDDEYTTAEDIQKMGRYIGNC
QFSTVPNAGHFLDLENRKAAKKVAQAIISFLA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggctatagagaaaagtattgtcaattacaagtcctggaatgtatatgttgaaaagcac
atatccaaccctgataatgaaactgtgataatggttaatggtgcattatcaaccactgct
gcttttaaaaataccgtcaaaaacctttcaggaaaattcaacattattcttttcgatttg
ccttttcttggtgagtcactggaacataatgatttaagtcatgtcattaccaaagatgat
gaagtcaatatcctgcttaatttaatcgaagtgcttgaaccacagtacattatctccatt
tcatggggtggtttgtcgtcattgctggcattgtcaaaaaaaccaggacaaatcaagaaa
gcagtcattgcctcattttcggctaatctcaacgacaaaatgcgcaattatgttgaacga
gccagaacatgcattcactccaagcggtttgaagatgcagcgatattattgaatgaggag
gtcggtaaatttttaccgccattattaaagcatatcaatctcaaacacctttctgcactg
gatgaatttgcgttccagcaagtcagttttcatattgatcaggttcttactctgaaagaa
gaaaattatattgatatctttaaaaatattaacgcagaggtactattcctcaatggcgaa
gatgatgaatacacaacagctgaagatattcagaaaatgggacgttacatcggtaattgc
caattcagcaccgtaccaaatgcaggccacttcctggatttggaaaatagaaaagccgca
aagaaggttgcacaggccattatttcattcctggcttga
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