Prodigiosinella confusarubida ATCC 39006: Ser39006_016960
Help
Entry
Ser39006_016960 CDS
T05290
Name
(GenBank) transcriptional regulator BetI
KO
K02167
TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sera03000
]
Ser39006_016960
Transcription factors [BR:
sera03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Ser39006_016960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_6
TetR_N
TetR_C_28
HTH_3
LacI
HTH_5
Fib_succ_major
Motif
Other DBs
NCBI-ProteinID:
AUH06888
UniProt:
A0A2I5TDD8
LinkDB
All DBs
Position
3707447..3708034
Genome browser
AA seq
195 aa
AA seq
DB search
MPKVGMQPIRRQQLIEATLAAVNEVGMHDASISQIARRAGVSNGIISHYFRDKNGLLEAT
MRYLLSRLGEAVTQRLAALNDNDPRTRLRAIIEGNFDESQTNSAAMKTWLAFWASSMHSP
QLYRLQRVNNRRLYSNLCTEFRRCLPRDHARLAAKGMAGLIDGLWLRSALSEQTFNRDEA
LLITHQFIEQQLNGV
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaaagtaggaatgcagccgataagacggcagcaattgattgaggcgacactggcc
gcagtgaacgaagtaggaatgcacgatgcgtcgatttcacagattgcacgtcgggctggc
gtatctaatggcattatcagtcactacttccgtgacaagaatggcctgttggaagcgacc
atgcgttacttgttaagtcgccttggcgaggctgtcacacaacggcttgccgcgttgaac
gacaacgatccacgtacccgtttgcgagccattatcgaaggcaatttcgatgaaagccaa
accaacagcgccgccatgaagacctggctggcattctgggccagcagtatgcatagccct
cagctctatcggctacaacgggtcaataatcgccgactttactcaaatttatgcaccgaa
ttcaggcgttgtctgcctcgcgatcatgcgcgactggccgccaagggaatggcgggcctg
attgatggattatggttacgcagcgcattgagtgagcaaacctttaaccgcgatgaagcc
ctgctgatcacccatcagtttattgagcagcaactgaatggcgtttaa
DBGET
integrated database retrieval system
