Prodigiosinella confusarubida ATCC 39006: Ser39006_017065
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Entry
Ser39006_017065 CDS
T05290
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00250
Alanine, aspartate and glutamate metabolism
sera00280
Valine, leucine and isoleucine degradation
sera00310
Lysine degradation
sera00410
beta-Alanine metabolism
sera00640
Propanoate metabolism
sera00650
Butanoate metabolism
sera01100
Metabolic pathways
sera01120
Microbial metabolism in diverse environments
Module
sera_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Ser39006_017065 (gabT)
00650 Butanoate metabolism
Ser39006_017065 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Ser39006_017065 (gabT)
00280 Valine, leucine and isoleucine degradation
Ser39006_017065 (gabT)
00310 Lysine degradation
Ser39006_017065 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Ser39006_017065 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sera01007
]
Ser39006_017065 (gabT)
Enzymes [BR:
sera01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
Ser39006_017065 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
Ser39006_017065 (gabT)
2.6.1.48 5-aminovalerate transaminase
Ser39006_017065 (gabT)
Amino acid related enzymes [BR:
sera01007
]
Aminotransferase (transaminase)
Class III
Ser39006_017065 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AUH05687
UniProt:
A0A2I5T9Y9
LinkDB
All DBs
Position
complement(3734366..3735682)
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AA seq
438 aa
AA seq
DB search
MQKFMAEQQVFADNTLLLDSRAEHIPRGVVTAHPLVIAKGKGAEVWDIEGNRYLDFVAGI
GVLNVGHNHPAVVSAVQQQLQQVSHVCFQVAAYPGYIELARRLNQLMGSDVAYKSIFFTS
GAEAVENAVKIARAYTGRSGVIAFDGAFHGRTSLGIALTGMSQPYKQNFGPFPGDIYRVP
FPNTFHGITEITCLAALESLFVAQIQAERVAAIIIEPIQGDGGFLPASPHFMQALRQLTQ
QHGIVLICDEIQSGFGRTGKMFGYEHSGIVPDLITVAKSLGGGLPISGVIGRGDIMDAAL
PGGLGGTYGGNALACAAALAVLDLMEEGTLLVRANTLGQQLRARLQQLAEKYACIGDVRG
TGFMLAAEIVDPDSRKPDAALTQKILDYACQEGLLLIKCGVYRNTIRFLAPLVTSDSQLE
EASHIFDIALARASGRLG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatttatggctgaacagcaggtatttgctgataacaccctgttactggattcc
cgcgcagagcatatcccgcgtggtgtcgtcaccgcacatccattggttatcgccaaaggc
aaaggggctgaggtctgggatattgaaggtaatcgttatctcgattttgtcgccggaatc
ggcgtcctgaatgtgggccataatcacccggcggtagtgtctgcggtacagcaacagctc
cagcaggtttctcatgtctgtttccaggtggcggcgtatcccggttacattgaattggcg
cggcgactgaatcagttgatgggcagcgacgtggcgtataaaagcatattttttaccagc
ggtgccgaagctgtggaaaatgcggtgaaaatagcccgagcctataccgggcgcagtggt
gtgatagcttttgacggcgcttttcatggccgtacatcgctaggtattgcgctcaccggc
atgagtcagccctacaaacagaatttcggcccgttcccgggagatatctatcgggttcca
tttcccaataccttccatggcatcactgaaattacctgtctggcggcgctggaatcgctg
tttgtagcacaaattcaggcggagcgggtcgcagcgataattatcgaaccgatacaaggg
gacggtggttttttgcccgcatcaccccattttatgcaggcgctgcggcaattaacccag
cagcacggcatcgtattgatttgtgatgagatccagagtggttttggccgcaccggaaaa
atgtttggttatgagcacagcggcatcgtgcctgatctgatcacggttgccaaaagtctt
ggcggcggattaccgatttctggggtgattggtcgcggcgatataatggatgccgctctg
ccaggcgggttgggcggtacttatggtggtaacgccctggcctgcgctgctgcgctggcg
gtgttggatctgatggaagaagggacgttgctggttcgggcaaatacgctggggcagcaa
ctgcgggccagattgcagcaactggcggaaaagtatgcctgcatcggtgacgtgcgcggc
acgggctttatgctggctgccgaaatagtcgatccagatagccgtaaaccggatgctgca
ttgacgcagaaaattctggattatgcctgtcaggaagggctgttactgattaaatgcggg
gtataccgtaataccatccgttttctggcaccgctggtcaccagtgattcgcaactggaa
gaagcctcgcatatctttgatattgcactggctcgtgcctcgggacgcttgggatag
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