Prodigiosinella confusarubida ATCC 39006: Ser39006_017140
Help
Entry
Ser39006_017140 CDS
T05290
Name
(GenBank) transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sera03000
]
Ser39006_017140
Transcription factors [BR:
sera03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Ser39006_017140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
HTH_23
HTH_3
HTH_36
HTH_24
HTH_38
HTH_28
Peripla_BP_4
HTH_50
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AUH05702
UniProt:
A0A2I5T9Y7
LinkDB
All DBs
Position
complement(3752785..3753801)
Genome browser
AA seq
338 aa
AA seq
DB search
MSLKVIAKKLGLSVTTVSRALNGYDDVAEETRLRVEEEARRRGYRPNTFARRLKMGKIDA
VGLVFPVRSAPLSNYTFMDMVAEISHELATQEIDLLLIADEDTTDHHAFLRMVESRRVDA
LIIAHTLPDDARLHCLQELNFPFLALGRSNLPSPYAWFDFDNQAGVALATDRLVSLGHQR
IAFLGENNPQSFIIQRREGYLAALQIAGLAFREAYFCLIEPSRRAGYQATLDLLALAEPP
TAIVTDCSTQGEGAALALRECGRLQGENAISLIIYDGLPGDSIIDTPVTAITQATRAEVG
RQIAQMVFRLIAGQDVSTLQVLWQPQLCLGSTDNPPSH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgaaggtgattgcaaaaaagctggggctatctgttactactgtcagccgtgcg
ctgaatggttatgatgatgtggccgaggaaactcgcctgcgagtggaagaagaggccagg
cgtcgcggctatcgtcccaatacctttgcccgccgtctgaaaatgggcaaaatagacgcc
gtcggactggtgtttcccgttcggtctgcgccactgagcaactatacgtttatggacatg
gtagcggaaatcagccatgagttggcaacgcaggaaattgatctgttgctgatagctgat
gaagacaccacggatcatcacgcatttctacggatggtggagagtcgccgcgtggatgcg
ctgatcattgctcacacactgcctgatgatgcacgtctgcattgcctacaggaactgaat
ttcccctttctggcgctgggacgtagcaatttgccgtccccgtatgcctggtttgatttt
gataaccaggccggtgtcgcgctggcgactgaccgtctcgtgagtctgggtcaccaacgc
attgcttttctgggggaaaacaatcctcaatcgttcattattcagcgccgggaaggttat
ctggcggcgctacagatagctgggctggcctttcgggaagcctatttttgtctgatcgaa
ccttctcgtcgtgctggttatcaggcgaccctggatttactggctctggcggaaccgccg
accgcgatagtgactgattgcagcacgcaaggtgagggtgcggcgctggcgttgcgggaa
tgtgggcgcttacagggggagaatgcgatatcgctgatcatctatgacggcctgcctggt
gactcgattattgatacgccggtgacggccatcacccaagcgacccgtgctgaagtgggg
cgacaaatagcgcagatggtttttcgtctgattgccgggcaggatgtgtcgacattacag
gtattatggcaaccacagctatgtcttggcagcacggataatccgccttcccactga
DBGET
integrated database retrieval system
