Prodigiosinella confusarubida ATCC 39006: Ser39006_017350
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Entry
Ser39006_017350 CDS
T05290
Name
(GenBank) transcriptional regulator
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sera03000
]
Ser39006_017350
Transcription factors [BR:
sera03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Ser39006_017350
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
GAF
MarR_2
HTH_24
HTH_29
GAF_2
HTH_Crp_2
HTH_28
HTH_11
HTH_36
wHTH-PRTase_assc
DUF5817_CT
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AUH05741
UniProt:
A0A2I5TA12
LinkDB
All DBs
Position
complement(3796238..3797047)
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AA seq
269 aa
AA seq
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MSEYKNVRGLSRGLDVLNALNRLDGGANCNQLSLLTGLHRTTVRRLLETLQQEGYVCRSA
FDDSYRLTLKVRQLSEGFRDEQWISALAAPLLGDLLREVVWPTDVTTLDVDEMVVRETTH
RFSRLSFHRAMVGRRLPLLLTASGLTYLAFCPENERQQIITMLAGREGDEYRLAREPVRL
AEILQRVQRNGYGENYQNWESESRIAAIAVPVRHDERLIGCLSLIYIAKAMTIEQAAQKY
LSILQRVADQIGESATQATHGEKTLTVNC
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatataaaaatgtgcgcggtttatcccgtgggcttgatgttctcaatgccctt
aaccgtctggatggtggcgcaaactgcaaccagctttcattattgaccggtttacatcgc
accacggtcaggcgcttgcttgaaacccttcagcaggagggttatgtgtgccgtagcgcg
ttcgatgatagctatcgcctgacattgaaagtgcgtcagttaagtgaaggatttcgtgac
gaacagtggatttccgctcttgctgccccattgctgggtgacttactgcgggaagtagtg
tggcctacggatgtgaccacacttgatgtggatgagatggtggtcagagaaactacccat
cgtttcagtcgactgtcgtttcaccgggctatggtcgggcgacggttgccattgttattg
acggcttccggtctgacataccttgcgttttgcccggagaacgaacgacagcaaattatt
accatgttggcggggcgtgaaggcgatgagtaccgtctggcgcgagaaccggtgaggctt
gcagaaatcttgcaacgcgtacaacgaaatggctatggcgaaaactatcagaactgggag
agtgagtctcgcatcgcggctattgcggtgccagttcgccatgatgagcggctcattggc
tgcctgagtttaatctatattgccaaggcaatgaccatagaacaggcggcgcagaaatat
ttatcaatattacaacgtgttgccgatcaaatcggtgaaagcgcaacgcaggcaacccac
ggggagaaaaccctgaccgttaactgttag
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