Prodigiosinella confusarubida ATCC 39006: Ser39006_017410
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Entry
Ser39006_017410 CDS
T05290
Name
(GenBank) formate hydrogenlyase transcriptional activator FlhA
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sera03000
]
Ser39006_017410
Transcription factors [BR:
sera03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ser39006_017410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
GAF_3
AAA_5
Mg_chelatase
AAA_2
AAA_16
AAA
HTH_8
AAA_19
AAA_3
PhoH
AAA_7
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AUH05752
UniProt:
A0A2I5TMG0
LinkDB
All DBs
Position
complement(3809199..3811382)
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AA seq
727 aa
AA seq
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MATRLTDSPSRLSILWQDALLKVSQTLLQQRSIDALLQVLDGLSFSVVRFGRVNLLLIDP
LHNQILFYRHDRQASCTICSEENVLLADGPGGVVWNTHALLHCDRVHFQRDFPHLIEQSA
YVGLSDYCQLPLLASHRALGGIEFLKTDGSRFTDSEIDFFQALSGVISVVVENICERELT
QREEERLRHERDHYRILVDVTNTVISKLELKALALEVSKEIHRFFGIDFIALVLKDSDGD
EKRLKYYATHYLAGRSPKQVQGEVDRAEALAAGVIDTNQVQLINAEQSIIHAGAPRYLAQ
WSDSQLKHACLLPLAFGNRVLGVLELAHRSDLTVSDAEIKLLRQIAARIAIALDNALAYE
QITRLKDSLIHENFYLTEQLTEHIHRVGGEEFGEIIGRSAAIRQVLEQVEMVAASDSTVL
ILGETGTGKELIARAIHSLSQRKSNRMIKMNCAAIPSGLLESDLFGHERGAFTGATSLRQ
GRFELADKSSLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKVIPVNVRLIAATNRDLK
QMVADREYRSDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTRKIARRMNRTIDSIPSDIL
RQLSRLPWPGNVRELENVIERAVILTRGTTLNLQMEELQHHLSPLEAPKPVYHATEVPSS
PMVAEKNLEQEGEEESERQRIIRVLRETNGIVAGPKGAAARLGLKRTTLLSRMQRMGISV
KEIENIE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacgactgacagattcaccttcccgtctttccattctgtggcaggatgcctta
ctgaaagtgtcacagacgttattgcagcaacgcagtattgatgcgctgttgcaggtgttg
gatggcctgtcattttcagtggtgcgttttgggcgcgtcaatctgttgctgatcgatcct
ctacataaccagatcctgttttaccgtcatgaccgtcaggcgagctgtacgatatgcagc
gaagagaatgtgctactggcggatggtccgggcggcgtagtgtggaacacccatgccttg
ctgcattgtgatcgtgtgcattttcaacgtgatttcccccatcttattgaacaatccgct
tatgttgggttgagcgactattgccagttaccattgttggcatcgcatcgcgcattgggc
ggcatcgagtttcttaaaaccgacggcagccggtttactgatagtgagatcgattttttc
caggccttgtccggcgttatctctgtcgtggtcgagaatatttgtgagcgcgagctgacg
cagcgcgaagaagaacgtctgcggcatgagcgcgatcactatcgtattttggtagatgtc
accaataccgtgatttccaagttggaactgaaagcgctggcgctggaagtttcaaaggaa
attcaccgcttttttggtatcgatttcattgcactggtattaaaggacagcgatggcgat
gaaaaaagattgaaatattacgccactcactaccttgccgggcgctcgcccaaacaggtg
cagggtgaagtagatcgtgccgaagcactggcagctggcgttattgatacgaatcaggtg
cagttgattaatgctgaacagtccattatccatgccggtgcgccgcgctatctggcacag
tggtctgacagccagttaaagcatgcctgcctgctgccactggcgtttggaaaccgggtg
ctgggtgttctggaactggcgcatcgcagtgatttgacggtaagtgacgcagaaataaaa
ctgttgcgtcagattgcggcccgtattgcgattgcgttggataatgcgctggcttatgag
cagattacgcggttgaaagactcgctgattcatgaaaatttctatctgaccgagcaattg
accgagcacattcatcgtgtcggtggtgaagagttcggtgagattattggtcgcagtgct
gctatccgccaggtgctggagcaggtggaaatggtggcggccagcgatagcacggtattg
atcctcggagaaactggtacgggtaaagagttgattgcccgggcgattcatagtctcagc
cagcgcaaatccaaccggatgatcaaaatgaactgcgcggctatcccttccggtttactg
gaaagtgatctgtttggtcatgagagaggtgcctttaccggcgcgactagcctacggcag
ggacgttttgagctggcggacaagagctcgctgtttctggatgaggtcggcgatattcca
ctggagctgcaacccaagttgctgcgggtattgcaggaacgggaaattgaacgtttaggt
ggcagtaaagtcattcctgtgaatgtaaggctgatcgccgctactaaccgcgatctaaaa
cagatggtggctgaccgtgagtaccgtagcgacctttactatcgtcttaatgtcttcccg
attgtgatcccgccactgcgtgagcggccggaagatattccgttgctagtgaaatttttc
actcgcaagatcgcccgccgaatgaatcgcactatcgacagtattccgtctgatattttg
cgccaattaagccgtctaccgtggccaggtaatgtgcgtgagttggagaatgtgattgag
cgagcggtgatcctgactcgtggtactacgctgaacctgcaaatggaagagttgcaacac
catctctcgccgctggaggcgccaaagccggtttatcatgcgactgaggtcccctcgtca
ccgatggtggccgaaaaaaacctggagcaagagggcgaggaggagtccgaacgtcagcga
atcatccgggtattgcgggaaaccaacggtattgtcgcgggtccgaaaggggctgccgcc
cggttgggcctgaagcgaaccacgctgctttcccgtatgcagcgaatggggatctcggtg
aaagaaatcgagaatattgagtga
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