Prodigiosinella confusarubida ATCC 39006: Ser39006_017435
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Entry
Ser39006_017435 CDS
T05290
Symbol
lacZ
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00052
Galactose metabolism
sera00511
Other glycan degradation
sera00600
Sphingolipid metabolism
sera01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Ser39006_017435 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
Ser39006_017435 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Ser39006_017435 (lacZ)
Enzymes [BR:
sera01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Ser39006_017435 (lacZ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
AUH05757
UniProt:
A0A2I5TMG9
LinkDB
All DBs
Position
3815861..3818974
Genome browser
AA seq
1037 aa
AA seq
DB search
MSISIYPHHTLTTLTAVLARRDWENPACTHVQRLPAHPPFQSWRTLDQARDCALSPQRLS
LNGEWVFSYFPQPEVVPESWLRQDLPDADQITVPSNWQIAGYDTPIYTNVKYPIPVNPPY
VPRQNPTGCYSLTFSMDSERINHEQTRIVFDGVSSAFHLWCNGHWVGYSQDSRLPAEFNL
TAYLKVGENRLAVMVLRWSDGTYLEDQDMWRMSGIFRDVTLLHKPDIHLCDVHITTPLHH
DYTQGTLCVQAQANLPEKTTSTWQLHVQLWRGKALVGETHRPFGSQIIDERGHYHDRVQL
QLPVEHPALWSAEAPNLYRAVIALETTEGALIEAEAYDVGFREVTISQGLLKLNGKPLLI
RGVNRHEHQPERGQAIDEATMRNDILLMKQHNFNAVRCSHYPNHPLWYRLCDRYGLYVVD
EANIETHGMQPMNRLSDDPGWLPAFAERVTRMVQRDRNHPCIIIWSLGNESGYGRNHDAM
YQWIKQQEPTRPVQYEGGGANSNATDIVCPMYARVDQDQPFPAVPKWSIKKWIGLPGETR
PLILCEYAHAMGNSLGGFDRYWQAFRQHPRLQGGFIWDWVDQALIQYDDQQHPFWAYGGD
FGDQPNDRQFCLDGLLFPDRSAHPSLYEAQRAQQFFQFELISTQPLTLKITSEYLFRHCD
NETLHWNIMQDDQQINAGSLPLTLAPQSSITITLLDTLPHTDNVEAMWLNVDVVQPNATD
WSAANHHCAWDQWQLPVSRLLPTPDHFDGTPPQLHQDDAWAHVYHNDQHWVFNRQTGQLE
QWWQDGNAGLLSPLQDNFVRAPLDNDIGISEVDHIDPNAWVERWKLAGLYQLKAQCIRME
AEQLSNRVQIVTEHTFCHRQQTLLISRKVWQINHQGVLTVDINVDTAVSLPALARIGLSV
QLADSHPSVSWLGQGPHENYPDRQLAARHGRWTLPLESMHTPYIFPSENGLRCHTRRLNY
GNWCVEGDFHFGIGRYSLTQLMDCSHHHLLKPEHGVWLNLDGFHMGVGGDDSWSPSVHSD
YLLTATHYHYQLRLQRQ
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttcaatctatcctcatcatacacttacgactctcacggctgttctggcccgg
cgtgattgggagaatccagcttgtactcacgttcagcgcttgccggcacatcccccattc
cagagctggcggacgctagatcaagccagagattgtgcgctgtcaccgcagcgactctca
ttaaatggcgaatgggttttcagctatttccctcaaccggaagtggtaccagaaagctgg
ttacgccaggatttacctgatgctgaccagatcaccgtgccctcaaactggcagatcgcc
ggttacgacacacccatttataccaatgtcaaatatccgattcctgtcaacccaccctat
gtacccagacagaatcccacggggtgttattcgctcacattttctatggacagtgagaga
ataaatcacgaacagacaaggattgtttttgacggtgtcagctcagcctttcatctatgg
tgtaatggacattgggtgggctattctcaggacagtcgcctaccggccgagtttaacctc
accgcatatctgaaagtgggagaaaaccgactcgccgtcatggtattgcgctggtcggat
ggtacctatctggaagatcaggatatgtggcgtatgagcggaattttccgcgatgtcacg
ttgctgcataaacctgatattcatctgtgcgatgtgcacatcaccacaccgttacatcat
gattacacccaaggaacgttgtgtgtgcaggcgcaggccaacctaccagaaaagacgacg
tcgacctggcaactgcatgtacagctgtggcgcggaaaagcgttggtgggagaaacccac
cgtccgtttggcagccagatcattgatgaacgtggacattatcacgaccgcgtacagcta
cagttacccgtcgagcatcccgcactatggagcgccgaagcccccaatctgtaccgtgcg
gtgatagcgctggaaaccacggaaggagcactgattgaagccgaagcctacgatgtcggt
tttcgtgaggtcaccatcagccagggattgctgaagcttaacggcaaaccgctgctgatt
cgcggtgtcaatcgccacgaacaccagcctgaacgcggacaagctatcgacgaagccacc
atgcgtaacgatattctgctgatgaaacagcacaatttcaacgcagtacgctgttcgcac
tatcccaatcacccattgtggtatcgcctgtgtgatcgctatggtttgtatgtggtagat
gaagccaatattgaaacccacggcatgcagccaatgaatcgtttatccgacgatccaggc
tggctacccgcgtttgcggaacgggtaacgcgtatggtgcaacgtgaccgcaaccacccg
tgcattatcatctggtcgttgggtaatgaatcagggtatggccgtaatcacgatgccatg
taccaatggatcaagcagcaggaacctacccgaccggtacaatatgaagggggcggcgcc
aacagcaacgcaacggatatcgtttgcccgatgtatgctcgcgtcgatcaggatcaaccc
ttcccggccgtcccaaaatggtcaatcaaaaagtggattggtctaccgggagaaacacgt
ccgctgattttgtgtgaatacgcccacgccatgggcaacagtctaggcggctttgatcgc
tactggcaggcattccgccaacatccccggctgcaaggcgggtttatctgggattgggtc
gaccaggcattgatacagtatgacgatcaacaacaccctttctgggcttatggcggagat
tttggcgaccaacccaatgatcgccaattctgtctggatggtttgctgttccccgatcgc
tctgcgcatcccagcctgtatgaggctcagcgcgcccagcaatttttccagtttgagctg
atttccacccagcccctgacactgaaaatcaccagcgaatacctgtttcgccactgcgac
aacgaaacgctgcactggaacatcatgcaggacgatcagcaaatcaatgctggcagtctg
ccgttgacactggcaccacagtccagcatcaccatcacattactggatacgctgccacac
accgacaatgtggaagccatgtggttaaatgttgacgtcgttcaacccaatgccaccgac
tggtcagccgctaatcaccactgcgcctgggatcagtggcaattgcccgtttcacggcta
ttaccgacgcctgaccatttcgatggaacaccaccacaactgcatcaggacgacgcctgg
gcacacgtttatcacaacgatcaacactgggttttcaaccggcagaccggccagttggaa
cagtggtggcaagatggcaacgcaggtctgctcagcccgttacaggacaattttgtccgc
gccccattagataatgacatcggcatcagcgaagttgaccacatcgatcccaacgcatgg
gtagaacgctggaagttggcgggcttatatcaactgaaagctcaatgcataaggatggaa
gcggagcagttaagcaaccgcgtgcaaatcgtgaccgaacataccttctgccaccggcag
caaacactactgataagccgcaaagtatggcagatcaaccatcaaggcgtactgacggtc
gatattaatgtcgatacggcagtgtccctgccagcgctggcccgcatcggattgagcgtt
caactggcggattcacacccatcagtaagctggctgggacaaggcccgcatgagaactac
cccgaccgtcaactggccgcacgccacgggcgctggacactaccgctggagtccatgcac
acaccgtatatttttccgtcagaaaatggtttgcgctgccatacccgacgactgaattat
ggcaactggtgcgtcgaaggtgatttccatttcggtatcggccgttatagcctgacgcag
ttgatggactgtagccatcatcacctgctgaaaccggaacatggcgtatggctgaatctg
gatggtttccatatgggggttggcggcgatgactcctggagtccgagcgtacatagcgac
tatctgttaaccgccactcactaccactaccaattacggctccagaggcagtga
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