Prodigiosinella confusarubida ATCC 39006: Ser39006_018070
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Entry
Ser39006_018070 CDS
T05290
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00190
Oxidative phosphorylation
sera01100
Metabolic pathways
sera02020
Two-component system
Module
sera_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Ser39006_018070 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ser39006_018070 (cydB)
Enzymes [BR:
sera01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
Ser39006_018070 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
AUH05867
UniProt:
A0A2I5TAG5
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Position
complement(3972435..3973574)
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AA seq
379 aa
AA seq
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MFDYEVLRFIWWLLIGVLLIGFAVTDGFDMGVGILVRLMGRNDVERRVMINCIAPHWDGN
QVWLITAGGALFAAWPTVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEDSRWRNMWD
WGIFAGSFIPPVVIGVAFGNLLQGVPFHMDEYLRLYYTGNFFQLLNPFGLLAGIVSLSMI
LAQGATYLMMRTTGELHIRSKVAAQVSSLLLVVTFALAGVWVVYGIDGYVITSVINTAAE
SNPLHKEVVRQAGAWMINFNKYPVLWAIPLLGVVLPLLTAMMARLGKGAMAFLFSSLSIA
CVILTAGTAMFPFIMPSVTMPNVSLTMWDATSSLFTLQVMTVVAIIFVPIVLAYTCWCYY
KMFGRITKEHVEQNSHSLY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatgaagtattgcgttttatctggtggctgctgattggcgtgttgctgatc
ggttttgcggttaccgatggttttgacatgggtgtgggcatcctggttcgcctgatgggc
cgaaatgatgtcgagcgccgggtgatgatcaattgcattgctccccattgggatggtaat
caggtgtggttgataactgctggtggtgcattgtttgctgcatggccaacggtttatgcc
gctgcattctctgggttctacgttgcgatgattctggtgctggcctcattgttcttccgt
ccggtcggtttcgactaccgttccaagattgaagactcacgttggcgcaatatgtgggat
tggggcatttttgccggtagctttatcccgccagttgttattggcgtggctttcggtaat
ctgctgcaaggcgttccattccatatggatgaatatctgcgcttgtactataccggtaac
ttcttccagcttctgaacccgttcggattactggctggtatcgtcagcctgagcatgatt
ctggctcaaggtgcgacttacctgatgatgcgtacaaccggcgaattgcacattcgttcc
aaagtcgcggctcaggtgtcatcacttctgttggtggttacgtttgcactggccggcgta
tgggttgtttatggtattgatggctatgtcatcacttctgtgattaatacggctgccgaa
tctaatccgctacacaaagaagttgttcgtcaggcgggagcatggatgattaatttcaat
aaatatccggtgctgtgggctattccgctgttaggtgtggtattgccgctattgacagca
atgatggcccggttaggaaaaggcgcaatggcatttctgttctcttcgctgagtattgca
tgtgtcattctgacagccggtacggctatgttcccattcattatgccgtctgtaaccatg
ccgaatgttagcctgaccatgtgggatgcgacatccagtttgtttacgctgcaggtaatg
actgtcgtggcgattatcttcgtaccgattgtgttggcttacacttgctggtgttactac
aagatgtttggccgtattaccaaagagcatgttgagcagaactctcattcgctgtattaa
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