Prodigiosinella confusarubida ATCC 39006: Ser39006_018080
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Entry
Ser39006_018080 CDS
T05290
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00020
Citrate cycle (TCA cycle)
sera00640
Propanoate metabolism
sera00660
C5-Branched dibasic acid metabolism
sera00720
Other carbon fixation pathways
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01120
Microbial metabolism in diverse environments
sera01200
Carbon metabolism
Module
sera_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sera_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ser39006_018080
00640 Propanoate metabolism
Ser39006_018080
00660 C5-Branched dibasic acid metabolism
Ser39006_018080
09102 Energy metabolism
00720 Other carbon fixation pathways
Ser39006_018080
Enzymes [BR:
sera01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
Ser39006_018080
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AUH05869
UniProt:
A0A2I5TMS3
LinkDB
All DBs
Position
complement(3975986..3976858)
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AA seq
290 aa
AA seq
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MSILIDKNTKVICQGLTGSQGTFHSEQAIAYGTQMVGGVTPGKGGTEHLGLPVFNTVREA
VEATGATASVIYVPAPFCKDSILEAIDAGIQLIICITEGIPTLDMLSVKVKLEQSGVRMI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDIGLGQSSCVGIGG
DPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHITKPVVGYIAGVTAP
KGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKSVLTR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgatcgataaaaacaccaaagttatctgccagggtttgactggtagccag
ggtaccttccactctgaacaggcgattgcttatggtacacaaatggtcggcggtgtaacg
ccgggtaaaggtggtaccgagcacctcggactgccggtgtttaatactgtgcgcgaagcg
gtagaggccactggtgccactgcatcagttatttatgtaccggctccattctgtaaagat
tctatcctggaagctattgatgctggcattcagttgattatctgtatcaccgaggggatc
ccgaccctcgacatgctgagcgtaaaggtcaagctggagcaaagcggtgttcgtatgatt
ggacctaactgtccgggcgtcattacgccaggtgagtgtaaaatcggtattatgccgggc
catattcacctgccaggtaaagtgggcatcgtctcccgctcaggtacattgacttatgaa
gccgtgaaacaaacgacggatattggtctggggcagtcgagctgtgttggtattggtggt
gatccgatccccggctcaaactttattgatatcctgaagctgtttgagcaggatccccaa
accgaggctattgtgatgatcggtgagattggtggtactgccgaggaagaggccgctgct
tatattaaagagcatattacaaaaccagtcgtcggctacatagccggggtgaccgcgcca
aaaggtaaacgaatgggtcatgccggggcaattattgccggtggtaaaggaactgcagat
gataaattcgcagcactggaagctgccggtgttaaaacggttcgtagtctggctgatatt
ggcgacgcagtaaaatctgtgctgacacgctag
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