Prodigiosinella confusarubida ATCC 39006: Ser39006_018085
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Entry
Ser39006_018085 CDS
T05290
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00020
Citrate cycle (TCA cycle)
sera00640
Propanoate metabolism
sera00660
C5-Branched dibasic acid metabolism
sera00720
Other carbon fixation pathways
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01120
Microbial metabolism in diverse environments
sera01200
Carbon metabolism
Module
sera_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sera_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ser39006_018085
00640 Propanoate metabolism
Ser39006_018085
00660 C5-Branched dibasic acid metabolism
Ser39006_018085
09102 Energy metabolism
00720 Other carbon fixation pathways
Ser39006_018085
Enzymes [BR:
sera01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
Ser39006_018085
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
ATP-grasp
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
AUH05870
UniProt:
A0A2I5TAF3
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All DBs
Position
complement(3976858..3978024)
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AA seq
388 aa
AA seq
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MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGV
KVVKSKEDIRAFAENWLGKRLVTYQTDANGQPVSQILVESATDIDKELYLGAVIDRASRR
VVFMASTEGGVEIEKVAEETPHLIHKAALDPLTGPQPYQGRELAFKLGLSGKQVTQFTKI
FMGLATMFLERDLALVEINPLVITQQGDLVCLDGKLGVDGNALFRQPELREMHDASQEDP
REEHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVGGGATKERVTE
AFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKK
LADSGLNIIAATSLTDAAQQVVAAVEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacacgagtatcaggcaaaacaactctttgctcggtatggtttacccgcaccc
accggttatgcctgcaccacgccgcgtgaggcagaagaagctgcatcaaaaattggtgct
ggtccctgggtggtcaagtgtcaggttcatgccggtggtcgaggcaaggctggcggcgtc
aaggtcgtaaaaagtaaagaagacatccgcgcctttgcggaaaattggctgggtaagcgt
ctggtgacttaccagactgatgccaatggtcagccagtaagccaaattctggtggaaagt
gctaccgacattgataaagaactctatctgggtgcagtgattgaccgtgccagtcgtcgt
gttgtcttcatggcttccactgaaggtggcgttgagattgagaaagtggctgaagaaacg
ccgcatctgattcataaagctgccttggatccgctgactggtcctcaaccttatcaagga
cgtgagttagcgttcaagctgggtctcagcggtaagcaggttactcagttcaccaagatt
tttatggggctggcaaccatgttcctggaacgtgatctggcattggtggaaatcaatcca
ttagtcatcacccaacagggtgatctggtgtgtctggatggcaaactgggcgttgatggc
aatgccttgttccgtcagccggaattacgtgagatgcatgatgccagtcaggaagatccg
cgtgaggagcatgctgcccagtgggagcttaattatgtggctctggatggcaacatcggt
tgtatggtgaatggcgccggtttggcaatgggcaccatggatattgtcaaattgcatggt
ggcgcgccagctaatttcctggacgtgggcggtggtgcaacgaaagaacgtgtaacagaa
gcttttaaaattattttatcggatgacaaggtaaaagcggtgctggtgaacattttcggt
ggcatcgtgcgttgtgatttgattgctgacggtattatcggggcggtagcagaagtgggg
gtaaatgtgcctgtcgttgtgcgtctcgaaggtaacaatgcagagctgggagcgaagaaa
ttggcggacagcggtttgaatatcattgctgcgaccagtctgacggatgcggctcagcaa
gtggttgctgcagtggagggtaaataa
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