KEGG   Prodigiosinella confusarubida ATCC 39006: Ser39006_018100
Entry
Ser39006_018100   CDS       T05290                                 
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
  KO
K00240  succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
Organism
sera  Prodigiosinella confusarubida ATCC 39006
Pathway
sera00020  Citrate cycle (TCA cycle)
sera00190  Oxidative phosphorylation
sera00650  Butanoate metabolism
sera00720  Other carbon fixation pathways
sera01100  Metabolic pathways
sera01110  Biosynthesis of secondary metabolites
sera01120  Microbial metabolism in diverse environments
sera01200  Carbon metabolism
Module
sera_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sera_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sera_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:sera00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Ser39006_018100 (sdhB)
   00650 Butanoate metabolism
    Ser39006_018100 (sdhB)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    Ser39006_018100 (sdhB)
   00720 Other carbon fixation pathways
    Ser39006_018100 (sdhB)
Enzymes [BR:sera01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     Ser39006_018100 (sdhB)
SSDB
Motif
Pfam: Fer2_3 Fer4_17 Fer4_8 Fer4_10 Fer4_18 Fer4_7
Other DBs
NCBI-ProteinID: AUH05873
UniProt: G4V4G7
LinkDB
Position
complement(3982457..3983173)
AA seq 238 aa
MKLEFSIYRYNPDVDDAPHMQDYSLDVDAGRDMMLLDALIQLKEQDPTLAFRRSCREGVC
GSDGVNMNGKNGLACITPISSLQRGNNKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPY
LLNNGRNPPAREHLQSPEQRAKLDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLAAYR
FLIDSRDTETQARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRSA
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaaactcgaattttccatttatcgttataacccagatgttgatgatgcgccgcatatg
caggattacagcctggatgttgacgctgggcgtgacatgatgctactggatgcgctgatt
cagttgaaagaacaggatcccacgttggcattccgtcgttcctgccgtgaaggtgtctgt
ggttcagacggagtaaatatgaacggaaaaaatgggctggcttgtattacgccgatttct
tccttgcagcgcggtaacaacaagatagtgattcgtcctcttcctggtttgccagtggta
cgtgatttggtagtagacatggggcaattctatgcccagtatgagaaaatcaaaccttac
ttgttgaataatgggcgaaatccaccggcacgtgaacatctgcaatctccagaacaacgg
gcaaaactggatggattatatgagtgcattatgtgtgcttgctgttctacgtcatgccca
tcattctggtggaatccggacaaatttatcggtccggccggattactggcggcatatcgt
ttcctgattgatagtcgcgatacggaaacccaggcacgtctggatgatttggacgatgct
ttcagtgtctttcgttgccacagtattatgaattgtgtcagcgtatgcccgaaagggctg
aatccgacacgagctatcggtcatatcaagtcaatgttgctgcaacgcagtgcctga

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