Prodigiosinella confusarubida ATCC 39006: Ser39006_018685
Help
Entry
Ser39006_018685 CDS
T05290
Name
(GenBank) isochorismate synthase MenF
KO
K02552
menaquinone-specific isochorismate synthase [EC:
5.4.4.2
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00130
Ubiquinone and other terpenoid-quinone biosynthesis
sera01053
Biosynthesis of siderophore group nonribosomal peptides
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01240
Biosynthesis of cofactors
Module
sera_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Ser39006_018685
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
Ser39006_018685
Enzymes [BR:
sera01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
Ser39006_018685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chorismate_bind
RCC1_2
Motif
Other DBs
NCBI-ProteinID:
AUH05972
UniProt:
A0A2I5TN30
LinkDB
All DBs
Position
complement(4099967..4101289)
Genome browser
AA seq
440 aa
AA seq
DB search
MKQLSGLLQRMQKELSKPLPEKAGFRPITLSMTLTETSLLLAWLASQPLYPQFYWQHRQD
DEEAAVCGQACNFNNIGEAETFLQQHTTDNRVRIWGLNAFGQQQRDGEQIAGYLFLPRIA
LLRQGNLLQVCVNLFSDTSLQDDAHQALALMRQLAPLHALPPLYAVIKHTQHQPDRQQWI
DMLHHALEDINAGKMEKVVPARATTLTLDTPLRATTFMAASRAVNHRCYHFMLAFDAHQA
FLGSSPERLYLRQINQLETEALAGTVASDRDDRRAAELADWLMNDVKNQCENMLVVDDIC
QRLRQSALTLDVMRPEVVRLRKVQHLRRSIQVTLREASDRVCLHLLQPTAAVAGLPRVAA
RQFLAQHEPFDRRWYAGSAGYLSRQQSEFCVALRSADIAENILTLYAGAGIVAGSDPQQE
WQELENKAAGLKSLLDGDMS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcaactttcaggcttgttgcaacgcatgcagaaagaattaagtaaaccattgcca
gagaaagccggctttcggcccattacattgtcgatgacgctgactgaaacctccttatta
ctggcatggctggcgtcacagcccttgtacccccaattttactggcagcaccgtcaggat
gatgaagaggccgccgtgtgtggccaggcctgtaacttcaataatattggagaagcagaa
acgtttttgcagcagcatacgactgataaccgtgttcgtatctgggggttgaatgctttc
gggcaacaacagcgggacggagagcagatagcgggctacctgttcttgccacgtattgcg
ctattgcggcagggtaatctgttgcaggtgtgcgttaacctgttcagtgacacatcgttg
caggatgatgcgcatcaggctctggcgttgatgcgccagcttgccccattacacgcccta
ccaccgctatatgcggtaattaagcacacgcagcaccaacctgatcgccagcagtggatc
gacatgttgcaccacgcgctggaagacattaacgctggcaaaatggaaaaggtagttcct
gctcgggcgaccaccctgacgctggatacgccgttgcgggcgacaacgtttatggccgcc
agccgtgcggtcaatcatcgctgttatcactttatgctggcgtttgatgcccatcaggct
tttctgggttccagccccgaacgtttgtatctccgccagataaatcaactggaaacagaa
gcccttgccgggaccgtggccagtgatcgggacgacaggcgcgcggcagaactggccgac
tggttgatgaatgatgtgaaaaaccagtgtgaaaacatgttggtggtggacgatatctgc
cagcgcttacgtcagtcggcactgacgctggatgtaatgcgacctgaggttgttcgcttg
cgcaaagttcagcatctgcgacggtccattcaggtaacattgcgtgaagcctcggaccgt
gtctgcctccacctgctacagcccactgcggcggtggcaggattaccgcgagtagcagct
cgacaattcttggcgcagcatgagccgtttgaccgtcgttggtacgctggatctgccggt
tatctttcccgtcagcagtcggagttctgtgtggcgctacgctcggcagatatcgcggaa
aatatactaacgctgtatgccggcgccggtattgtggctggttctgatccacaacaagag
tggcaggagctggaaaacaaggccgctggacttaaatcgctattagacggtgatatgtca
tag
DBGET
integrated database retrieval system
