Prodigiosinella confusarubida ATCC 39006: Ser39006_019040
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Entry
Ser39006_019040 CDS
T05290
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00900
Terpenoid backbone biosynthesis
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
Module
sera_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Ser39006_019040
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sera01006
]
Ser39006_019040
Enzymes [BR:
sera01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Ser39006_019040
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Ser39006_019040
Prenyltransferases [BR:
sera01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Ser39006_019040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AUH06036
UniProt:
A0A2I5TAX8
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All DBs
Position
4185666..4186577
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AA seq
303 aa
AA seq
DB search
MTDFDTQLNVLYQRSNAALSCFISALPFQSSPLVDTITYGTLLGGKRLRPFLVYTTGHLF
GLATESLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHMKFGEASAILAGDALQT
LAFSILADAPMLHVSDRDRLAMLSELAQASGVSGMCGGQALDLAAEGHQVDLSSLEQIHR
HKTGALIRASVRLGALAAGERGRDALPYLDRYANAIGLAFQVQDDILDVIGDSTTTGKRQ
GADQQLGKSTYPGLLGLENAKAKARDLYQESLAALSDLVASSDIPLVVTPLQALANYIVE
RDK
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacagatttcgatacgcagctgaatgttctctaccagcgcagtaatgctgccttgagc
tgctttatttcagcactaccttttcagagtagtccattggtagacaccataacttatggc
acgcttctcggagggaaacggctgcgtccgtttctggtttatactaccggacaccttttt
ggattagccacagaaagccttgatgcgccagcggcggcggttgaatgtattcatgcctat
tcactcattcacgacgatctgcccgcgatggataatgacgacctgcgccgaggacaacct
acctgtcacatgaaatttggcgaggccagcgctattctggcaggagacgcattgcagacg
ctggcgttctctatactggctgacgcgcctatgctgcatgtcagtgaccgtgaccggttg
gcaatgttatctgaactggctcaggccagtggcgttagcggaatgtgtggtggtcaggcg
ctggatcttgctgcggaagggcatcaggtggatttgtcctcgctcgaacagatccatcgc
cacaagaccggcgcattgattcgagcctccgtacgattaggcgcacttgcagctggcgag
cgtggacgggatgccttaccttatctcgatcgctacgccaatgctatcgggctggctttt
caggttcaggatgacatactggatgtcattggtgatagcaccacgacggggaaacgtcag
ggagccgatcaacaattggggaaaagtacctaccccggcttattgggtctggagaacgcg
aaagccaaagctcgagatctttaccaggaatctttagccgcgctgagtgatttggtggct
tccagtgatattccattagtcgtaacaccactgcaagccttagcgaattacatcgttgaa
cgcgataaataa
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