Prodigiosinella confusarubida ATCC 39006: Ser39006_019150
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Entry
Ser39006_019150 CDS
T05290
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sera03400
]
Ser39006_019150
DNA repair and recombination proteins [BR:
sera03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ser39006_019150
Archaeal homologous recombinant proteins
Ser39006_019150
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AUH06056
UniProt:
A0A2I5TB00
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Position
4211022..4212260
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AA seq
412 aa
AA seq
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MRIIHTSDWHLGQYFYTKSRAAEHQAFLRWLIHQVQQHDVDAVIVAGDIFDNGTPPSYAR
EIYNRFVVDLQHTGCQLVILGGNHDSVATLNESRSLLACLNTQVIASSDNDIDRQVLVLN
NRQGEPGALLCAIPFLRPRDLLTSQAGQSGADKQRALLDAIAEHYQHCYQVVCQRRDELG
LPLPIIATGHLTTVGVTTSDSVRDIYIGTLEAFPAQLFPPADYIALGHIHRPQRIAKTEH
IRYSGSPIALSFDELNHEKSVYLVTFDQGSLHTVDTLTIPETQPMQLIKGDLVEIERRLN
GFREYQGASPVWLDIEVATQDYLNDIQKRIEELTVGLHVEVLLLRRAREQHLQMLIQQEK
ETLNELKPEEVFERRLALEPDLETPRRQRLQTLFTQVMHDIEQDEHRQEDKV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattattcacacttctgactggcatcttggtcaatatttttataccaagagccgt
gccgctgaacaccaggcctttctacgctggttgattcatcaagttcaacaacacgatgtg
gatgcagtaatagtagcaggtgacattttcgataacggaaccccgcccagctatgcacgg
gagatatataaccgttttgtcgtggatttgcagcacaccggttgccagttggtgatactt
ggcggaaaccatgactcagtggccacgctgaacgaatcccgttccctgctggcctgcctg
aacacgcaggtcatcgccagcagcgataacgatattgaccggcaagtgctggtactgaat
aaccgtcagggagaaccgggtgccctattgtgcgccattcctttcttgcgtccgcgcgat
ttgctaaccagccaggctggccagtctggtgcagataaacagcgagcgctgctggacgcc
attgccgaacattatcagcactgctaccaggttgtctgtcagcgacgtgatgagctggga
ttacccttgcccatcattgctactggtcacctcaccactgtcggtgtcacaacatcggat
tcagtgcgtgatatttatattggcacgttggaagcctttccagctcaactctttcccccc
gccgattatattgccctcggacacattcaccgccctcaacgaatcgcaaagaccgaacac
attcgttatagcggctcccccatcgcattgagctttgatgagttgaatcacgaaaaatcc
gtttatctggtcacgtttgaccaaggatcactccacactgtcgatacattgaccatccca
gaaacacagccgatgcagttgatcaaaggcgatttggtagaaattgaacgtcgcctgaac
ggattcagggagtatcagggagcatcgccagtctggctggatattgaagtcgccacacag
gactacctgaatgacattcagaaacggattgaagaactgacggtggggctacatgttgaa
gtgctgctactgcgccgggcgcgggaacaacatttacaaatgctgatacaacaggaaaaa
gagacactgaacgaactgaaaccagaagaggtcttcgaacggcgcctggcgttggagccc
gacctggagacaccacgtcgacaacgacttcagacactgtttacacaggtcatgcatgac
atcgaacaggatgaacaccggcaggaggacaaggtatga
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