Prodigiosinella confusarubida ATCC 39006: Ser39006_019720
Help
Entry
Ser39006_019720 CDS
T05290
Name
(GenBank) adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ser39006_019720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sera03400
]
Ser39006_019720
Enzymes [BR:
sera01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Ser39006_019720
DNA repair and recombination proteins [BR:
sera03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ser39006_019720
Prokaryotic type
Ser39006_019720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AUH06158
UniProt:
A0A2I5TB92
LinkDB
All DBs
Position
4339493..4340560
Genome browser
AA seq
355 aa
AA seq
DB search
MMQTQPFTRQVLDWYERYGRKTLPWQLKKTPYKVWLSEVMLQQTQVTTVIPYFQRFMAKF
PDVTALATAPLDEVLHLWTGLGYYARARNLHKAAQIITAKHGGIFPTTFEAIADLPGIGR
STAGAILSLALEQHYPILDGNVKRVLARCYAVAGWPGKKDVEQRLWAISEDVTPAQHVNC
FNQAMMDLGAMVCTRSRPKCELCPLNNCCIAYANHSWTEYPGKKPKHTLPEKTAWFLLLQ
QDDTVWLEQRPAMGLWGGLFCFPQFNNRDELESWLRQRGIKTDQLQQWVAFRHTFSHFHL
DIVPLWINAAPYRSCMDEGAGLWYNLTQPPSVGVAAPVDRLLRQLAKPRSASVDS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaacgcaaccgttcactcgacaggtgctggattggtatgagcgatatggtcgc
aaaaccctaccttggcaactgaaaaaaacgccgtataaagtctggctgtctgaagtaatg
ttacagcagactcaggtgactaccgttattccttatttccagcggttcatggcaaagttt
cccgatgtaaccgcgctggcaactgcaccgttggacgaagtgctgcatttatggaccggg
ttgggttattacgctcgcgcccgtaatttgcataaagccgctcagattatcacggcaaag
catggtggaatatttcccactacgtttgaagccatcgccgatttaccaggtatcggccgt
tcaaccgccggtgccattctttcgctggcgctagaacagcactaccctattctggatggc
aatgtaaaacgcgttctggctcgttgttatgccgtcgctggctggccgggaaaaaaagac
gtggaacagcgattatgggctatcagtgaggatgtcacgccggcacagcacgtcaactgc
ttcaatcaggccatgatggatctgggggccatggtatgcactcgcagtcggccaaaatgc
gaactgtgtccactgaataattgctgcatcgcctatgccaaccacagttggactgaatat
cccggtaaaaaacccaaacacacactgccggaaaaaacggcctggtttttactgctgcaa
caggatgatacggtctggctggagcaacgtccggccatgggattatggggagggctattc
tgttttccacagttcaataatcgggatgaactagagagctggttgcggcaacgtggtata
aaaacagatcaactgcaacagtgggtggcatttcgccatactttcagtcattttcatctg
gatatcgtgccgttatggatcaatgccgcaccatatcgttcctgcatggatgaaggcgct
ggtctttggtataacttaacgcagcctccttccgtcggggtagccgctccggtagaccgg
ttgttacgtcagttggctaagccacgatcagcatccgttgattcttga
DBGET
integrated database retrieval system
