Prodigiosinella confusarubida ATCC 39006: Ser39006_019755
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Entry
Ser39006_019755 CDS
T05290
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00330
Arginine and proline metabolism
sera00480
Glutathione metabolism
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Ser39006_019755
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Ser39006_019755
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Ser39006_019755
Enzymes [BR:
sera01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Ser39006_019755
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AUH06163
UniProt:
A0A2I5TNL8
LinkDB
All DBs
Position
complement(4346481..4348634)
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AA seq
717 aa
AA seq
DB search
MKQLKIAANAAIASRIITTRPIVALSQTDFTDIAAVVVSVEEARSGILSVLHHTGFAIPA
FVAREQTNDSLEMLPPGSEWLWLDESGEHAETLEQAAEGYQRALLPPFFGRLIKYAAMGN
STFACPGHQGGQFFRKHPAGRQFYEFYGENVFRSDICNADVKLGDLLIHEGAAKKAQKFA
ARVFNSDKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLE
TARNPFGFIGGIDAHCFDETYLRELVREVAPERADEQRPFRLAVIQLGTYDGTIYNARQV
VDSIGHLCDYILFDSAWVGYEQFIPMMEQCSPLLLELNENDPGIFVTQSVHKQQAGFSQT
SQIHKKDTHIKGQKRFCNHKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGAGGRRLWLE
CVKLGIETRKQLLACCSLIRPFVPVSVGGIHWQDHETDVMAQDVRFFNFRPGDRWHSFEG
YAPEQYFVDPCKLLLTTSGIDALTGDYTPFGIPATILANYLREHGIIPEKCDLNSILFLL
TPAEDSLKMQHLVQALVRFEQLIEQDAPLSSVLPGLYHKYEQRYEGYTLRQLCQEMHNFY
VSHNVKLLQKAMFRKSSFPEVVMLPQEANSAFVRGDIEFIALDEAEGRVAAEGALPYPPG
VLCVVPGEVWGGAVLRYFLALEEGINLMPGFAPELQGVYSVAQADGSKRLYAHVIAQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttaaaaattgcggctaatgcggcgattgcctcccgtataatcacaacgcgt
ccgattgtggcgttgagtcagaccgattttaccgatatcgccgctgtagtcgtctcggtg
gaagaagcgcgcagcggcattttgtcggtgctgcatcacaccggttttgctattccggct
tttgtggcgcgggagcaaacgaatgacagtctggaaatgctgccacctggcagtgagtgg
ttgtggctggatgagtctggcgaacacgcagaaactctggaacaggcagcggaaggttat
cagcgcgcgctgttgccacctttctttggtcggctgatcaaatatgccgctatgggaaat
agtacatttgcctgcccgggacatcagggcgggcaattctttcgcaagcatccggcgggc
cgtcagttttatgagttttatggcgaaaatgtgttccgttcggatatctgtaatgccgat
gtcaaactaggcgatctgctgattcatgaaggggcggctaaaaaggcgcagaagtttgct
gcccgggtatttaactcggataaaacctatttcgtgctgaacgggacctcggcagccaat
aaagtggtgactaatgcactgctgacccgtggcgatctggtgttgtttgaccgcaataac
cataaatccaaccatcacggcgcgttgattcaggctggcgctacaccggtttatctggaa
acggcgcgaaatccgtttggctttattggcggtattgatgcgcactgttttgatgaaacc
tatctgcgtgagctggtgcgggaggtcgcgccggaacgtgctgatgaacagcgtcctttc
cggctggcggtgattcagcttggtacttatgatggcaccatctataacgcccgtcaggtg
gtggatagtattggccatctgtgtgattacatcctgtttgattccgcgtgggtgggatat
gagcagtttattccgatgatggaacagtgctctccgctgttgctggaactgaacgagaat
gatcccggtattttcgttactcagtcggtacacaagcagcaggctggtttttcccaaacg
tcacagatccataaaaaggatactcacattaaagggcagaagcggttttgcaaccacaaa
cgcctgaacaatgcgtttatgctgcatgcatcgaccagtccgttttatccgctgtttgcc
gcgctggatgtcaatgccaagatgcatgaaggtgctggtggccgtcgtttatggctggag
tgtgtcaagttagggatcgagactcgcaagcaactgttggcgtgctgctcactcatccgg
ccgtttgtcccggtcagtgtcggcgggatccactggcaggatcacgaaaccgacgtaatg
gcgcaagatgtccgtttcttcaatttcaggccgggtgatcgctggcattcgtttgaaggt
tatgcgccggagcagtattttgtcgacccctgtaaactgttactgaccacctcaggaatt
gatgcgctcaccggtgattacaccccatttggtattccggccacaattctggctaattat
ctgcgtgaacacggcattatcccggagaaatgcgatcttaattccatcttgttcctgcta
acgccagcggaagatagtctcaagatgcagcatctggtgcaggctctggttcgttttgag
cagttgattgaacaggatgcaccgctgagtagcgtgttgccggggttgtatcataaatat
gaacagcgttatgaaggttatacgctgcgccagttatgccaggaaatgcataatttttat
gtcagtcataatgtgaaactgctacaaaaagcgatgtttcgtaaatcctctttccctgaa
gtggtgatgttgccgcaggaagccaatagcgcttttgtccggggcgatatcgagttcatt
gcgctggatgaagctgaaggtcgtgttgcggcagaaggcgcattgccttatccaccggga
gtgctttgcgtggtgccaggcgaagtatggggcggcgcggtactgcgttatttcctggcg
ttagaagaaggaatcaatttgatgccgggtttcgcaccggagttgcaaggggtttacagc
gtggcgcaagccgatggtagtaagcgactgtatgcgcatgtgattgcacagtaa
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