KEGG   Prodigiosinella confusarubida ATCC 39006: Ser39006_019915
Entry
Ser39006_019915   CDS       T05290                                 
Name
(GenBank) type III-A CRISPR-associated RAMP protein Csm5
  KO
K19140  CRISPR-associated protein Csm5
Organism
sera  Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:sera00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sera02048]
    Ser39006_019915
Prokaryotic defense system [BR:sera02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    Ser39006_019915
SSDB
Motif
Pfam: RAMPs YgjP-like
Other DBs
NCBI-ProteinID: AUH06190
UniProt: A0A2I5TBB3
LinkDB
Position
4381379..4383058
AA seq 559 aa
MTRDQTPRRHTACDSDNMQYFTLTCLSPVHVATGDSLNPGEYLIDENALYELGQGGLSPA
LTATQRSELLTILESNDPALPLTVQRFLAREAGKLKYAARRMCPLLPGISRYYQSRLGQV
MQNDTKNKKQMINQLELMRHVGAALGAPYIPGSTLKGAIRTALVSALNQGQPLQAERRET
DKLSSKVAQDAERQLLGFDTRRDSPRYRIEHDPFHWLQVGDAVSPAEHPPMLDYWLVRRQ
PFKRTEKQDNKADNMELSPVECLKPRQSPLHCQITVKTPPTALAIKNPRLKQWLGKVSQL
AQQVNRITLPQCHHELAWLAEKHIGTDDVYAPGQNWVAQMQQLLRQLDDPLQRGEALLLR
VGKYGGAISKTVAGWRHIARLGRQGTRTTYHPDVTTCTLALPQADALTQALPFGWVLLHQ
PDQPEVTEFVASHHDWCQQQQQRLDAHQQQQHTHRQQRQQLAQAREEEAQRLADKARQSK
ARQSIMSLAEQLASEQTFQHKNPNGPLRGQLATCVGCVATEGSAEEKAELCTLFDDILNY
WGIKPGKDKKLTALRNKLL
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgacccgcgaccagacgccacgtcgccacaccgcctgtgacagcgacaacatgcaatac
tttaccctcacctgcctgtcgccggtgcatgtcgccaccggcgacagcctgaaccccggt
gaatacctgatagacgaaaatgcactgtatgaactggggcaaggtggtctgagcccggcg
ctcacggcgacacagcgcagcgagttgctcactattctggagagcaatgaccctgctctg
ccgctgaccgtgcagcgttttctggcacgggaagcgggcaagctgaaatacgccgcccgc
cggatgtgcccgctgttacccggcatcagccgttattaccagtcacggctcgggcaggtg
atgcagaacgataccaaaaacaaaaagcagatgatcaaccagctagagctgatgcgccac
gtcggggccgcactgggcgcgccttatattcccggatctacgctcaaaggggctatccgc
accgcactggtcagcgcgctcaatcaaggccagccactgcaagccgagcgacgggaaacc
gacaaactgagcagcaaggtggcgcaggatgcggaacgccagctactgggctttgatacc
cgccgcgacagcccgcgataccgcattgagcatgaccccttccactggctacaggtgggg
gatgccgtaagcccggcagagcacccgcccatgctggattactggctggtacgccgccag
ccgttcaaacgcaccgagaagcaggacaacaaggcggacaatatggaactgtcgccggtt
gaatgccttaaaccccggcaaagcccgttgcactgccagataaccgtgaaaacgccgccc
accgctctcgcaataaaaaacccgcgcctgaagcagtggcttggcaaggtgtcgcaactg
gcgcaacaggtgaacaggataaccctgccgcaatgccatcacgagctggcatggctggcc
gaaaagcacatcggcacggatgatgtgtacgcccccggccagaactgggtggcgcagatg
cagcaattactgcgccagttagacgacccgctacagcgcggcgaggcactcttgctgcgg
gtgggcaaatacggcggagccatcagcaaaaccgtggcaggctggcggcatatcgcccgg
ctggggagacaaggcacgcgcaccacctaccacccggacgtcaccacctgcacgctggcg
ctgccgcaagctgatgcgctgacacaggcgctgccctttggctgggtactgttgcaccag
cctgaccagccggaggtgaccgagtttgtcgccagccatcatgactggtgccagcaacag
caacagcggcttgacgcgcatcagcaacagcagcacacccaccgccagcaacgccagcag
ttggctcaggctcgtgaagaggaagcgcagcggctggcagacaaagcccgccagagcaaa
gcgcgccagtccatcatgtcgctggcagaacaactggcgagtgagcaaacgtttcagcat
aaaaaccccaacggcccgctgcgcggtcagttagccacctgtgtgggttgcgttgccact
gaaggctcagcagaagagaaagccgagttgtgcacactgtttgacgacatcctcaactat
tggggcatcaaacccggcaaagataaaaagctcacggccttgaggaataagctgttatga

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