Prodigiosinella confusarubida ATCC 39006: Ser39006_021415
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Entry
Ser39006_021415 CDS
T05290
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00010
Glycolysis / Gluconeogenesis
sera00020
Citrate cycle (TCA cycle)
sera00620
Pyruvate metabolism
sera00650
Butanoate metabolism
sera00720
Other carbon fixation pathways
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01120
Microbial metabolism in diverse environments
sera01200
Carbon metabolism
sera01210
2-Oxocarboxylic acid metabolism
Module
sera_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Ser39006_021415 (nifJ)
00020 Citrate cycle (TCA cycle)
Ser39006_021415 (nifJ)
00620 Pyruvate metabolism
Ser39006_021415 (nifJ)
00650 Butanoate metabolism
Ser39006_021415 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
Ser39006_021415 (nifJ)
Enzymes [BR:
sera01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
Ser39006_021415 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_16
Fer4
Fer4_10
Fer4_6
Fer4_9
TPP_enzyme_C
Fer4_2
Fer4_21
Fer4_8
Fer4_17
Fer4_4
Transketolase_C
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
AUH06444
UniProt:
A0A2I5TC54
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All DBs
Position
4690485..4694018
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AA seq
1177 aa
AA seq
DB search
MITTDGNNAVTSVAWRTNEVIAIYPITPSSTMAEQASAWSSDGRKNIWGDTPRVVEMQSE
AGAIATVHGALQTGALATSFTSSQGLLLMIPTLYKLAGQLMPFVLHVAARTVASHALSIF
CDHSDVMAVRQTGCAMLCASNVQEAQDFALISQIASLNSRLPFIHFFDGFRTSHEINKIE
PLSDVQLHQLLPQQAIAAHRERALTPDHPVIRGIASNPDTFFQAREATNPWYDNAVRHVE
QAMNDFANVTGRQYQPFEYYGHPEATRIIVLMGSGVGTSEEMIDTLLTRGEKVGVVKVRL
YRPFSARHLLSVIPQQAQRIAVLDRTKEPGSLAEPLYLDVMTALAEAFSRGERSLMPRVI
GGRYGLSSKEFTPQCVEAVFKELALTNPRPRFTVGIYDDITHLSLPLSAETTPSHCTLEA
LFYGLGSDGTVSAAKNSIKIVGNATPLFVQGYFVYDSKKAGSLTVSHMRVGPHPINAAYL
IDQADFVACHQWQFMDKYNMVERLKPGGIFLINTPYPSDDLWHRLPQEVQAELNQRQARV
YCINAARIARECQLGARINTVMQMAFFHLSRILPGDDAREKLRSAIASSYGNKGQDLVER
NWQALDATLDALAAVNLEPVNPESGCRPPVVSDAAPDFVKTVTAAMLAGLGDSLPVSALP
PDGTWPTGTTQWEKRNIAEEIPLWKPELCTQCNHCVAACPHSAIRAKVVPADAMASGPSS
LQSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQDPTIKAINMASRLEHLTVE
KTHYDFFLQLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDHLL
VANATGCSSIYGGNLPTTPWTTDAQGRGPAWANSLFEDNAEFGLGFRLSIDQHRQRTLRL
LLQLAPQLPAELVVDLQEATATTDLRRQQVAQLREQLSKINSEPARILAADADHLVDKSV
WLIGGDGWAYDIGYGGLDHVMSLSENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGEKG
KRKVRKDLGINIMMYGHVYVAQISLGAQLNQTVKAIQEAEAWPGPSLIIAYSPCEEHGYD
LAFSHDQMRQLTTTGFWPLYRFDPRRSEQGKPALVTDSRPPSAGLSETLLNEQRFRRLNN
QSPDDAARLYQEAEEDLRRRYDFLTMMAGKTEKTSSE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaccgacggtaataacgcggtcacctccgtggcctggcgaaccaatgaagtc
atcgccatctaccccatcaccccaagttccaccatggcagagcaggcgtcagcctggtcg
agtgatggacgtaaaaatatctggggagacacgccacgcgtagtcgagatgcagtcggaa
gccggtgctattgcgactgtacatggtgcgttacagaccggtgcgttggcgacgtccttt
acttcttcacagggattactgttaatgatcccgacactgtacaaactggccggccagttg
atgccgtttgtactgcatgttgcggcgcgtaccgtcgccagccatgcgttgtctattttc
tgtgaccattccgatgtcatggcggtacgtcagacaggctgcgccatgttgtgcgccagc
aacgtacaggaagcgcaggatttcgcactgatatcccaaatagccagcctgaacagccgt
ttaccctttattcatttttttgatggattccgcacctcacacgagatcaacaagattgaa
ccgctcagcgatgtgcaactgcatcagttactaccacagcaggccattgccgcacaccgt
gagcgagcacttacacctgaccatccggtgatccgcggtatcgcctcaaacccggatact
ttcttccaggcccgtgaagccaccaatccctggtatgacaacgccgtccggcatgtcgag
caggcaatgaatgattttgccaacgttaccgggcgtcagtaccaaccatttgaatattat
ggtcatccagaggcgacgcgcattatcgtgctgatgggttctggcgtgggcaccagtgaa
gaaatgattgatacgctgcttacgcgcggtgaaaaagtcggggtggtaaaagtgcggtta
taccgcccattctccgctcgtcatttgctgtcggttatcccgcaacaggcgcagcgtatt
gctgtgctggaccggaccaaagaaccgggatcgttggctgaaccgctgtatctggatgtc
atgaccgcactggcggaagccttctctcgcggtgagcgctcactgatgccacgagtgatc
ggtggacgttacggtctctcctcaaaagaattcacaccgcaatgcgtggaagcggtattt
aaagagttagcactgaccaacccccggccccgtttcaccgtgggaatttatgatgacatc
acccatctatccttgccgctcagcgccgaaacgacacccagccactgcacacttgaagca
ctgttctatggactgggcagtgacggcaccgtctctgcggccaagaattccatcaagatc
gtcgggaatgccacacccttgtttgtacagggttacttcgtctatgactccaaaaaagcc
ggcagtctgaccgtttcccatatgcgtgtcggccctcatccgattaacgccgcctacctg
attgatcaggccgattttgtcgcctgtcaccagtggcagttcatggataagtacaatatg
gtggaacgactgaaacccggtggcattttcctgattaataccccttacccaagtgatgac
ctctggcatcgtctgccacaggaagtgcaggccgagctgaaccagcgccaggcccgggtt
tattgcatcaatgccgccagaattgcccgtgaatgccagttaggcgcacggattaacacc
gtcatgcaaatggcgttcttccatctatcccgcatcttgccaggggatgatgcacgggaa
aaactgcgttcggctatcgctagcagttacggtaataaagggcaggatctggttgagcgc
aactggcaggcgttagatgccacgcttgacgcattagctgcggtgaatctggaaccggtg
aacccggaaagcgggtgccgcccaccggtagtatccgatgccgcgccagatttcgtaaaa
accgtgaccgcagccatgcttgccgggttgggtgatagcttaccggtctcggccttacca
ccggacggcacctggccgaccggcaccacccagtgggaaaaacgcaatatcgcagaagag
attccgttgtggaaaccagagctttgtacccagtgcaaccattgcgtggcagcctgccct
cattcggcgattcgcgctaaagtcgtgcccgctgacgccatggcttcgggaccgtcatca
ctgcaatcactggatgtcaaatcccgtgacatgcggggccaaaagtacgtactacaggtc
gcgccggaggactgcaccgggtgcaatctctgcgtggaagtctgccctgccaaagatcgc
caggatccgacaatcaaggccatcaatatggcgtcacgactggaacatctgaccgtagaa
aaaacgcactatgatttctttctgcaactgccggaaattgatcgttccaaactggagcgc
attgatatccgaacgtcgcagctgatcaccccgctgtttgaatattccggtgcctgctcc
ggttgtggtgaaacaccttatatcaagctgttgacccagttgtatggtgatcacttactg
gtagccaacgctaccggttgctcttccatttacggcggcaacctgccgacaacaccctgg
actaccgatgctcagggacgtgggccggcctgggccaactcgttgtttgaagataatgcc
gaattcggtcttggtttccgccttagcatagatcaacaccgtcaacgcacactacggctg
ctgctgcaactggcaccacagttaccggcagaactggtcgtcgatttgcaggaagcgacc
gccaccacggaccttcgccgccagcaggtcgcacagttacgggagcaactgagcaagata
aacagcgaacccgcccgcatactggccgccgatgccgatcatctggtggataaatccgtc
tggctgatcggcggagacggctgggcctatgatatcggttatggtggtctggaccatgta
atgagcctgtcggaaaacgtcaacgtactggtacttgatacccagtgttactccaacact
ggcggacaacagtccaaagccaccccgttgggagccgtgacgaagtttggtgaaaagggc
aagcgcaaggtacgcaaagacttgggcatcaatatcatgatgtacggccatgtctatgtg
gcgcagatttcccttggcgcccaactgaatcaaacggtgaaagccattcaggaagccgag
gcctggcctggtccgtcattgatcattgcctacagcccttgtgaagagcatggttacgat
ctggcgttcagtcacgaccagatgcgccagcttactacgaccggcttctggccgctgtac
cgcttcgatccgcgacgtagcgagcaaggtaaaccggccctggtgacggattcccgtccg
ccgtccgccggtctgagcgaaaccctgcttaatgaacaacgcttccgccgtcttaacaac
caatcgccggatgatgcggcacggctttaccaggaagctgaagaagatctgcgccgtcgt
tatgattttctgaccatgatggccggaaaaaccgaaaaaacgtcatcggagtaa
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