Prodigiosinella confusarubida ATCC 39006: Ser39006_021845
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Entry
Ser39006_021845 CDS
T05290
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ser39006_021845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_021845
Transporters [BR:
sera02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Ser39006_021845
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Glyco_hydro_62
Motif
Other DBs
NCBI-ProteinID:
AUH06525
UniProt:
A0A2I5TCC3
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All DBs
Position
complement(4792415..4793572)
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AA seq
385 aa
AA seq
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MNKINGNYTLSAICLGLLSFLSTALAAEMPTSIGKGEGQLNIIAWPGYIERGESDKNYDW
VTPFEKQTSCKVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIYGKRVQPINPALIP
NWKNIDPRLMKGAWFNVGGKVYGTPYQWGPNLLMYNTKTFPTAPDSWSVIFVPQILPDGK
SNQGRVQAYDGPIAIADAALYLKSTQPDLKIEDPYQLNETQYQAVLKLLRVQHPLIHRYW
HDASVQMSDFKNEGVVASSSWPYQANALKSEKQPIATVFPKEGVTGWADTTMLAADAEHP
NCAYQWMNWSLEPKVQGDVAAWFGSVPSVPAGCKASTLLGANGCETNGFNKFTAISFWKT
PRSEGGKYVPYSRWTQDYIAIMGGR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagattaacggtaattacaccctatctgctatttgtttgggcctgctaagtttt
ctaagtaccgcgttggcggctgaaatgccaacaagcattggcaaaggcgaggggcaatta
aatattattgcgtggccgggttacatcgagcgcggcgaaagtgacaagaattatgactgg
gtcactccgtttgaaaaacaaaccagctgtaaggtgaatgttaaaaccgccgcgacgtct
gatgaaatggtcagcttgatggcgaagggcggttatgacctggtgaccgcttccggtgat
gcgtcattgcgtctgatctacggcaaacgtgttcagccaatcaacccggcactgatcccc
aactggaagaatatcgacccgcgtttgatgaaaggcgcatggtttaatgttggtggcaaa
gtctacggcacgccgtatcagtgggggccaaacctgctgatgtataacaccaaaaccttc
ccgaccgcaccagacagctggtcagttatcttcgttccacaaattctgcccgacggcaaa
agcaatcaggggcgcgttcaggcctacgatggcccgatcgccattgctgacgccgcgctg
tatctgaaaagtacccagccggatcttaaaatcgaagacccttatcagcttaatgaaacg
cagtatcaggcggtgctgaaattgctgcgcgtccagcatccgctgatccaccgttactgg
cacgatgcgtcggttcagatgagtgatttcaaaaatgaaggcgtggtagccagcagttcc
tggccgtatcaggctaacgcgctgaaaagcgagaagcagccgattgccactgtattcccg
aaagaaggtgttaccggctgggcggataccaccatgttagcggcagatgccgaacatcct
aattgtgcttaccagtggatgaactggtcacttgaaccgaaagtgcagggcgacgttgcg
gcgtggtttggctctgtgccaagcgttccggctggctgtaaagccagtacgttgttgggc
gccaacgggtgcgaaaccaacggattcaataaattcaccgcgatttcattctggaaaacc
ccgcgatccgaaggtgggaaatacgtcccctatagtcgctggacgcaggactacatcgcc
atcatgggcggtcggtga
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