Prodigiosinella confusarubida ATCC 39006: Ser39006_022630
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Entry
Ser39006_022630 CDS
T05290
Name
(GenBank) HTH-type transcriptional activator RhaS
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sera03000
]
Ser39006_022630
Transcription factors [BR:
sera03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Ser39006_022630
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AUH06655
UniProt:
A0A2I5TQ29
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Position
complement(4948201..4949037)
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AA seq
278 aa
AA seq
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MTLLCGDEFFASQAATVAVEPRMPQCAFPEHHHDFWEIVLVDQGVGVHVFNDQPYALCSG
AVFFVRDNDRHLFEQVEELHLTNVLYRSPRGFRFLSDIAPFLPYGANGEWLGQWQVNTPV
MQQLKQLISRLATLADSAQPEDIAASESLFLQTLVLLKQKCFQMQGDGSQQQGVQALLGW
LQNNFSEDVNWDVLADRFSLSLRTLHRQLKQHTGMTPQRYLNRLRLLEARRRLQQSDDSI
TTIAHACGFGDSNHFSTQFRKAFSLAPKSLRHQALNED
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgacattactttgtggcgatgaattttttgcttcacaggcagcgaccgtcgctgttgaa
cccaggatgccgcagtgcgctttccctgaacatcatcatgatttctgggagattgtgctg
gtagaccagggggttggtgtgcacgtgtttaatgaccaaccttacgcgttgtgcagtggt
gcggtgttttttgtgcgagacaacgatcgccacctgtttgaacaggtggaggagctacat
ctgaccaatgtgctgtatcgttccccgcgtggttttcgtttcctttctgatattgcaccg
tttctgccctatggtgccaatggggaatggttgggacagtggcaggtgaatacgccggtg
atgcaacagctcaaacagttgatttcccggctggccactctggccgacagcgcccagccc
gaggatatcgcggccagtgaaagcctgttcttgcagaccctggtactgctgaagcagaaa
tgttttcagatgcagggtgatggcagccagcaacaaggcgttcaggcgttgctgggatgg
ttgcagaacaatttcagtgaagacgtgaactgggatgtgttggctgatcggttttctctg
tcgctgcgcacgctgcataggcagctaaagcagcatactggtatgacgccgcaacgttat
ctgaaccggttgcgattgctggaggcccgtcgtcgtttgcagcaaagcgatgactctatc
acgaccatcgctcacgcttgtgggttcggcgacagtaaccatttctcgacacagtttcgc
aaagcgttttctctggcacctaaatcgctgcgccatcaggcgcttaatgaggattga
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