Serratia sp. B1: QEP77_00610
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Entry
QEP77_00610 CDS
T10611
Symbol
kdsD
Name
(GenBank) arabinose-5-phosphate isomerase KdsD
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
serb Serratia sp. B1
Pathway
serb00541
Biosynthesis of various nucleotide sugars
serb01100
Metabolic pathways
serb01250
Biosynthesis of nucleotide sugars
Module
serb_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
serb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QEP77_00610 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
serb01005
]
QEP77_00610 (kdsD)
Enzymes [BR:
serb01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
QEP77_00610 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
serb01005
]
Lipid A
QEP77_00610 (kdsD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
DUF2529
SIS_2
Motif
Other DBs
NCBI-ProteinID:
WIF06991
LinkDB
All DBs
Position
complement(119725..120711)
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AA seq
328 aa
AA seq
DB search
MSNIELQPGFDFQQAGKEVLQIERDGLAQLDSYINADFTRACETIAACGGKVVVMGMGKS
GHIGCKIAATFASTGTPSFFVHPAEASHGDLGMVTPQDIVLAISNSGESSEILALIPVLK
RQRITLICMTNNPESSMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLK
ARGFTPEDFALSHPGGALGRKLLLRVSDIMHSGDEMPHVSADASLRDALLEITRKNLGLT
VICDDLMKIAGIFTDGDLRRVFDMGINLHEAKIAHVMTPGGVRVRPNILAVDALNLMQQR
HITALLVADGDQLLGVVHMHDMLRAGVV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacattgagttgcaaccgggcttcgattttcaacaggccggcaaagaagtgctt
cagatagagcgtgacgggctggctcagctcgacagctacatcaacgcagacttcacccgc
gcctgcgaaacgatcgccgcctgcggcggcaaagtggtggtgatgggcatgggcaaatcc
ggccatatcggctgcaagatcgccgcgaccttcgccagcaccggcaccccctcattcttc
gtgcacccggcggaagccagccatggcgatttgggcatggtcactccgcaggatatcgtg
ctcgccatctccaactccggtgagtccagcgagatcctggcgctgatcccggtgttgaaa
cggcagcggatcaccctcatctgcatgaccaacaatccggaaagttcgatgggcaaggcg
gcggacatccacctgtgcatcaaggtgccgcaggaagcctgcccgctggggttggcgccg
accaccagcaccaccgccacgctggtgatgggcgatgcgctggccgtcgcgctgctgaag
gcgcgcggcttcacgccggaagatttcgcgctgtcgcatccgggcggcgcactcggccgc
aagctgctgctgcgggttagcgatatcatgcacagcggcgacgaaatgccccacgtcagc
gccgacgcctcattgcgcgacgcgctgctggaaatcacccgcaaaaatctgggtctgacg
gtgatctgcgacgatctgatgaaaatcgccggcatctttaccgatggcgacctgcgccgg
gtgttcgatatgggcatcaacctgcacgaagccaagatcgcccatgtcatgacgccgggc
ggcgtgcgggtgcgccccaacatcctggcggtcgatgcgctgaatctgatgcagcaacgc
cacatcaccgcgctgctggttgccgatggcgaccagttgctgggtgtggtacatatgcat
gacatgctgcgcgccggcgtcgtttaa
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