Serratia sp. B1: QEP77_05925
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Entry
QEP77_05925 CDS
T10611
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
serb Serratia sp. B1
Pathway
serb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
serb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QEP77_05925 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serb03400
]
QEP77_05925 (nfo)
Enzymes [BR:
serb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
QEP77_05925 (nfo)
DNA repair and recombination proteins [BR:
serb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QEP77_05925 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WIF07812
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All DBs
Position
complement(1210702..1211541)
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AA seq
279 aa
AA seq
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MKFVGAHVSASGGVDQAVIRAHELEATAFALFTKNQRQWKAAPLAADVIDKFKSACAQYG
YGPGQILPHDSYLINLGHPVADALEKSREAFIDELQRCEQLGLTLLNFHPGSHLLQIDED
KCLARIAESINIALDKTAGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTEEECERTFKQLGDIVGFNYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDPRFDNIPLILETVNPDIWAEEIAWLKAQQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtcggtgcacatgtcagcgcgtcaggcggcgtggatcaggcggttatccgc
gcgcacgaattggaggcgaccgcgttcgccctgttcaccaaaaatcagcgtcaatggaag
gccgccccgctggccgccgacgtgatcgataagttcaagagcgcctgcgcccagtacggt
tacgggccggggcaaatcctgccgcacgacagctacctgatcaatctggggcacccggta
gccgacgcgttggaaaaatcgcgcgaggcgtttatcgacgagctgcagcgctgcgaacag
ctggggctgacgctgctgaacttccaccccggcagccacctgctgcaaatcgacgaagat
aaatgcctggcgcgcatcgccgaatcgatcaacatcgcgctggataaaaccgccggcgtg
acggccgtgatcgagaacaccgccggccagggcagcaatctgggcttcaaattcgagcac
ctggcggcgatcatcgacggcgtcgaagacaaaagccgcgtcggcgtttgcatcgacacc
tgccacgccttcgccgccgggtacgatctgcgcaccgaagaagaatgcgagcgcaccttc
aagcagttgggcgacatcgtcggtttcaactacctgcgcggcatgcacctgaacgacgcc
aagagcgagttcaacagccgcgtcgaccgccatcacagcctgggggaaggcaacatcggc
aaaacggtgttcagctacatcatgcgcgatccgcgtttcgacaatatcccgctgattctg
gaaacggtaaatccggatatctgggccgaagagatcgcctggctgaaggcgcagcagtaa
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