Serratia sp. B1: QEP77_08680
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Entry
QEP77_08680 CDS
T10611
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
serb Serratia sp. B1
Pathway
serb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QEP77_08680 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serb03400
]
QEP77_08680 (ruvB)
Enzymes [BR:
serb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEP77_08680 (ruvB)
DNA repair and recombination proteins [BR:
serb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QEP77_08680 (ruvB)
RecFOR pathway proteins
QEP77_08680 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_22
Mg_chelatase
AAA_3
AAA_16
nSTAND3
AAA_14
Rad17
AAA_2
AAA_18
RNA_helicase
AAA_17
Bac_DnaA
NTPase_1
AAA_28
AAA_24
NB-ARC
TsaE
ABC_tran
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WIF08246
LinkDB
All DBs
Position
1768633..1769637
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLISAEPLNEEEVLDRAIRPKLLTEYVGQPHVREQMEIFIQAAKQRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLQHIVSRSAGCLGLELSDEGAHEVARRARGTPRIANRLLRRVRDFAEVRANG
VISGAVAAQALDMLNVDAEGFDYMDRKLLLAIIDKFTGGPVGLDNLAAAIGEERETIEDV
IEPFLIQQGFIQRTPRGRLATQHAYRHFGLEREA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgatcgcctgatctccgccgaaccgctcaacgaggaagaagtcctcgat
cgcgccattcgtcccaagctgctgaccgaatatgtgggccagccgcacgtgcgcgagcag
atggagattttcatccaggcggccaagcagcgcggcgacgcgctcgaccacctgctgatc
ttcggtccgccggggctggggaaaaccaccctggccaacatcgtggccaacgaaatgggc
gtgaatttgcgtaccacctccggcccggtgctggagaaggcgggcgatctggcggcgatg
ctgaccaaccttgaaccgcatgacgtgttgttcatcgatgagattcaccgcctgtcaccg
gtggtggaagaggtgctgtatccggcgatggaagactatcagctggatatcatgatcggc
gaagggccggcggcgcgttcgattaagctcgatctgccgccgtttaccttggtgggtgca
accacccgcgccggttcgctgacctcaccgctgcgcgatcgcttcggcattgtccagcgg
ctggagttttatcaggtggcggatctgcagcacatcgtctcgcgcagcgccggctgcctg
gggctggagctgtccgacgagggcgcccatgaggtagcccgccgcgcgcgcggcacgccg
cgtatcgccaaccgtctgttgcgccgggtgcgcgacttcgccgaagtgcgcgccaacggc
gtgatcagcggcgcggtggcggcgcaggcgctcgatatgcttaacgtcgatgccgaaggc
ttcgactatatggatcgcaaactgctgttggcgattatcgacaagtttaccggtggcccg
gtcgggttggataacctggcggcggcgatcggcgaggagcgcgagaccatcgaagacgtg
atcgaaccgttcctgatccagcagggctttatccagcgcacgccgcgcggccgtctggcg
acgcagcacgcctaccggcatttcggcctcgaacgcgaagcgtaa
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