Serratia sp. B1: QEP77_12910
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Entry
QEP77_12910 CDS
T10611
Symbol
sdeB
Name
(GenBank) multidrug efflux RND transporter permease subunit SdeB
KO
K19585
multidrug efflux pump
Organism
serb Serratia sp. B1
Brite
KEGG Orthology (KO) [BR:
serb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serb02000
]
QEP77_12910 (sdeB)
Transporters [BR:
serb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
QEP77_12910 (sdeB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF561
Motif
Other DBs
NCBI-ProteinID:
WIF04977
LinkDB
All DBs
Position
2618445..2621588
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AA seq
1047 aa
AA seq
DB search
MDFSRFFIDRPIFAAVLSILIFVAGVIAIPLLPISEYPDVVPPSVQVRAEYPGANPKEIA
ETVATPLEEAINGVENMMYMKSVAGSDGVLVTTVTFRPGTDPDQAQVQVQNRVAQAEARL
PEDVRRQGITTQKQSPALTLVVHLVSPSGKYDSLYLRNYATLKVKDELARLPGVGQVQIF
GAGEYAMRIWLDPNKVAARGLTASDVVSAMQEQNVQVSAGQLGAEPMPTRSDYLLSINAQ
GRLQTEEEFGNIILKSGDNGEIVRLRDVARIEMGSGSYALRAQLNNKDAVGIGIFQSPGA
NAIELSDAVRGKMAELATRFPDGMSWKSPYDPTVFVRDSIRAVVDTLLEAVILVVLVVIL
FLQTWRASIIPLLAVPISVVGTFAALYLLGFSLNTLSLFGLVLAIGIVVDDAIVVVENVE
RNIEEGLSPLAAAHQAMREVSGPIIAIAVVLCAVFVPMAFLSGVTGQFYKQFAVTIAIST
VISAINSLTLSPALAARLLKPHGAPKDLPSRLIDRLFGWLFRPFNRFFASGSQRYQHGVS
RVLGRRGAVFVVYLLLLIAAGVMFKTVPGGFIPTQDKLYLIGGVKMPEGASLERTDAVIR
KMSAIGLSVDGVTDAVAFPGLNALQFTNTPNTGTVFFALESLSTRTRTAAQINAEINARI
SQIQEGFAFSIMPPPILGIGQGSGYSLYVQDRGGLGYGALQTAINTMSGAIMQTPGMGFP
ISSYQANVPQLDAKIDRDKAKAQGVPLNALFSTLQTYLGSSYINDFNRYGRTWKVMAQAD
GQFRDSVEDIANLRTRNDKGEMVPIGSMVSIGTTYGPDPVIRYNGFPAADLIGDADPRVL
SSTQAMSALTQMAGKLLPNGMNIQWTDLSYQQSTQGNAALVVFPVAVLLAFLALAALYES
WTLPLAVILIVPMTMLSALFGVWLTGGDNNVFVQVGLVVLMGLACKNAILIVEFARELEM
QGKGIVEAALEACRLRLRPIVMTSIAFIAGTIPLILGHGAGAEVRGVTGITVFSGMLGVT
LFGLFLTPVFYVTLRRLVARKTQTQTA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcccgttttttcatcgaccggccgatcttcgccgcggtgctgtcgatactg
atttttgtcgccggggtgatcgccattccgctgctgccgatcagcgagtacccggacgtg
gtgccgcccagcgtgcaggtgcgcgccgaatacccgggcgccaacccgaaagagattgct
gaaacggtggcgacgccgctggaagaagcgatcaacggcgtcgaaaacatgatgtacatg
aaatcggtcgccggctccgacggcgtgctggtgaccaccgtcaccttccgcccgggcacc
gatcccgatcaggcgcaggtgcaggtgcaaaaccgcgtggcgcaggccgaagcgcgtctg
ccggaggatgtgcgccgccagggcatcactacccagaaacagtctccggcgctgacgctg
gtggtgcatctggtatcgccttccggcaagtacgactcgctgtacctgcgcaactacgcc
accctgaaggtcaaggatgaactggcccgcctgccgggcgtcggtcaggtgcagatcttc
ggcgccggcgaatacgcaatgcgcatctggctcgatccgaacaaggtcgccgcgcgcggg
ctgaccgcctccgacgtggtgagcgccatgcaggagcagaacgtgcaggtctccgccggc
cagctcggcgcggagccgatgccgacgcgcagcgactatctgctgtcgatcaacgcccag
ggccgcctgcaaaccgaagaagagttcggcaacatcattctcaagagcggcgataacggc
gagatcgtgcggctgcgcgacgtggcgcgcatcgaaatgggttccggcagctacgcgctg
cgcgcccagctcaataacaaggatgcggtcggcatcggcatcttccagtcgccgggcgcc
aacgccatcgagctgtcggacgcggtgcgcggcaagatggccgagctggcgacgcgcttc
ccggacggcatgagctggaaatcgccgtacgatccgacggtgttcgtgcgcgattcgatc
cgcgcggtggtggacaccctgctggaagcggtgatcctggtggtgctggtggtcattctg
ttcctgcagacctggcgcgcctcgatcattcccctgttggcggtgccgatctccgtagtc
ggcaccttcgccgcgctgtatctgctcggcttctcgctcaacacccttagcctgttcggg
ctggtgctggcgatcggcatcgtggtggatgacgccatcgtggtggtggagaacgtcgag
cgcaacatcgaagaggggctgtcgccgctggcggcagcgcaccaggcgatgcgcgaggtc
tccggcccgatcatcgccatcgccgtggtgctgtgcgcggtgtttgtgccgatggcgttc
ctctccggcgttaccggccagttctacaaacagttcgccgtcaccatcgccatctcgacg
gtgatctccgccatcaactcactgaccctgtcaccggcgttggcggcgcgcttgctgaag
ccgcacggcgcaccgaaagatctgccgtcgcgcctgatcgaccggctgttcggctggctg
ttccggccgttcaaccgcttcttcgccagcggctcgcagcgttatcagcacggggtatcc
cgcgtgctgggccgacgcggcgcagtgttcgtcgtctacctgctgctgctgatcgccgcc
ggggtaatgttcaagaccgtgcccggcggctttatcccgacgcaggacaagctgtatctg
attggcggcgtgaagatgccggaaggcgcctcgctggagcgcaccgatgcggtgatccgc
aagatgagcgccatcggcctgagcgtggacggcgtcaccgatgcggtggccttccccggc
ctgaacgcgctgcagttcaccaatacgccgaataccggcacggtattcttcgcgctggag
tcattgagcacccgtacccgcaccgcggcgcagatcaacgccgagatcaacgcgcgcatt
tcgcagatccaggaaggtttcgccttctcgatcatgccgccgccgatcctcggcatcggc
cagggttccggctattcgctgtacgtgcaggatcgcggcgggctgggttacggcgcgctg
cagaccgcgatcaacacgatgtccggcgccattatgcaaacgccgggcatgggcttcccg
atctcctcttatcaggccaacgtgccgcagctggacgccaaaatcgatcgcgacaaggcc
aaggcccaaggggtgccgctcaatgcgctgttcagcacgctgcagacctacctcggttcg
tcttacatcaacgactttaaccgttacggccgcacctggaaggtgatggcgcaggccgac
ggccagttccgcgacagcgtggaagacatcgccaacctgcgtacccgcaacgacaaaggc
gaaatggtgccgatcggcagtatggtcagcatcggcacgacctacggcccggatccggtg
atccgctacaacggtttcccggcggcggacctgatcggcgacgccgatccgcgcgtcctc
tcctctacccaggcgatgagcgcgctgacgcaaatggccggcaagctgttgccgaacggc
atgaacatccagtggaccgatctgagctaccagcaatcgacccagggcaacgccgcgctg
gtggtgttcccggtcgcggtgctgctggcgttcctcgcgctggcggcgctgtatgaaagc
tggacgctgccgctggcggtgatcctgatcgtgccgatgaccatgctgtcggcgctgttc
ggcgtgtggttgaccggcggcgacaacaacgtgttcgtgcaggtcgggttggtcgttctg
atggggctggcctgcaagaacgcgattctgatcgtcgagttcgcccgcgagctggaaatg
cagggcaaaggcatcgtcgaggcggcgctggaagcctgtcgcctgcggttgcgaccgatc
gtgatgacctccatcgccttcatcgccggcaccatcccgctgatcctcggccacggcgcc
ggcgccgaagtgcgcggcgtcaccggcatcacggtgttctccggcatgctgggggtcacc
ctgttcgggctgttcctgacgccggtgttctacgtcaccctgcgtcgcctggtggcacgc
aaaacgcagacgcagacggcgtaa
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