Serratia sp. B1: QEP77_17770
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Entry
QEP77_17770 CDS
T10611
Symbol
smdB
Name
(GenBank) multidrug efflux ABC transporter permease/ATP-binding subunit SmdB
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
serb Serratia sp. B1
Pathway
serb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
serb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
QEP77_17770 (smdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serb02000
]
QEP77_17770 (smdB)
Transporters [BR:
serb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
QEP77_17770 (smdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
nSTAND3
RsgA_GTPase
AAA_29
MMR_HSR1
Dynamin_N
AAA_23
AAA_33
DEAD
Mg_chelatase
AAA_25
NB-ARC
DUF87
Motif
Other DBs
NCBI-ProteinID:
WIF05737
LinkDB
All DBs
Position
complement(3570891..3572669)
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AA seq
592 aa
AA seq
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MNKVQKLWPTLKRLLAYGSPYRKPLGVAVLMLWVAAAAEVAGPILVSYFIDNYVAKGQLP
LMIVGGLAAAYILLELLAAALHYFQALLFNQAAVGVVQRLRTDVMDAALRQPLSAFDTQP
VGQLISRVTNDTEVIKDLYVMVVSTVLKSAALIGAMLVAMFSLDWRMALVAICIFPAVFV
VMGIYQYYSTPIVRRVRSYLADINDGFNEVINGMGVIQQFRQQVRFGERMSAASQSHYLA
RMQTLRLDGFLLRPLLSLFSALVLCGLLMLFGFSGEGVIGVGVLYAFINYLGRLNEPLIE
LTSQQSILQQAVVAGERIFELMDRSQQSYGADDRPLAGGSIDITDLSFAYRADKKVLQHI
SLAVPSRGFVALVGHTGSGKSTLANLLMGYYPVSEGEVRLDGRPLSSLSHRTLRQGVAMV
QQDPVVIADSVLANVTLGRNIDEEAVWRALETVQLASLVRGFPQGIHTRLGEQGNNLSVG
QKQLLAMARVLVQAPQILILDEATANIDSGTEQAIQRALRVIREHTTLVVIAHRLSTIVD
ADSILVLHRGQAVEQGNHQQLLAQQGRYYQMYQLQLAGEQLAEAVRDESQPA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtgcaaaagctgtggccgacgctgaagcggctgctggcctacggctcgccg
taccgcaaaccgctgggggtggcggtgctgatgctgtgggtggcggcggcggcggaagtc
gccgggccgatcctggtcagctattttatcgataattacgtcgccaaagggcaactgccg
ctgatgattgtcggcgggctggcggcggcctacattctgctggagctgctggcggcggcg
ctgcactacttccaggcgctgctgttcaaccaggcggcggtaggcgtggtgcagcggctg
cgtaccgacgtgatggacgccgcgctgcgccagccgctcagcgccttcgacacgcaaccg
gtcgggcaattgatctcgcgcgtcaccaacgacaccgaagtgatcaaggatctgtacgtg
atggtggtctccacggtgctgaaaagcgccgcgctgatcggcgctatgctggtggcgatg
ttcagcctcgactggcgcatggcgttagtggctatctgcatcttcccggcggtgttcgtg
gtgatgggcatctatcaatattacagcacgccgattgtgcgccgggtgcgcagttatctg
gcggacatcaacgacggtttcaacgaagtgatcaacggcatgggcgtgatccagcaattc
cgccagcaggtgaggttcggcgagcgcatgagcgccgccagccaatcgcactatctcgcg
cgcatgcagacgctgcggctcgacggttttctgctgcggccgctgctcagtctgttttcg
gcgctggtgctgtgcggtttgctgatgttgttcggcttcagcggcgaaggcgtgattggc
gtcggcgtgctctatgccttcatcaactacctggggcgtttgaacgaaccgctgatcgag
ttgacgtcacaacagtcgatcctgcagcaggcggtggtggccggcgaacgtattttcgaa
ctgatggatcgcagccagcaaagctacggcgcagacgatcgtccgttggccggcggcagc
atcgacatcaccgatctgagcttcgcctaccgtgcggataaaaaggtgctgcagcatatt
tcgctggcggtgccctcacgcggcttcgtggcgctggtcggccataccggcagcggcaag
agcacgctggctaacctgctgatgggctattacccggtcagcgaaggggaagtgcgtctc
gacggccgtccgctctccagcctgtcgcaccgcacgctgcgccagggcgtggcgatggtg
caacaggatccggtggtgatcgccgattcggtgctggccaacgtgacgctggggcgcaac
atcgatgaagaagccgtctggcgggcgctggaaacggtgcagctggcgagtctggtgcgc
ggcttcccgcagggtatccatacccggctgggggagcagggcaataacctgtcggtcggg
cagaaacagctgctggcgatggcgcgggtattggtgcaggcgccgcagatcctgatcctc
gacgaggcgaccgccaacatcgactcgggcaccgagcaggctatccagcgggcgctgcgc
gtgatccgcgagcacaccacgctggtggtgatcgctcaccgcctctcgacgatcgtcgat
gccgattccattctggtgctgcatcgcggccaggcggtggagcagggcaaccatcaacag
ctgctggcgcagcaggggcgctactaccagatgtatcagctgcagctggcgggcgagcag
ttggcggaagcggtgcgcgacgagagccaacccgcctga
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