Serratia sp. B1: QEP77_20925
Help
Entry
QEP77_20925 CDS
T10611
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
serb Serratia sp. B1
Pathway
serb03018
RNA degradation
Brite
Enzymes [BR:
serb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QEP77_20925
Messenger RNA biogenesis [BR:
serb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QEP77_20925
Ribosome biogenesis [BR:
serb03009
]
Prokaryotic type
rRNA helicases
QEP77_20925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WIF06238
LinkDB
All DBs
Position
complement(4225609..4227531)
Genome browser
AA seq
640 aa
AA seq
DB search
MTTEFETSFADLGLSAPIISALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA
FSLPLLHNLQADLKAPQILVLAPTRELAVQVAEAMTDFSKHMNGVNVVALYGGQRYDVQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAEIPA
EHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
IERTMKLTIPEVELPNAELLGERRLAKFAAKVQQQLESSDLDLYRALLTKLQPEEELDME
TLAAALLKMAQGERPLILPPDPVFKPRQRREFNDRDDRRGDRRDSRDSRDGDRPRRERRD
VGEMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEIL
NHFTRTRILNKPMNMQLLGDAQPFERRERRDGGNGGERRGNGRPFNGERREGGPRRSFGE
RREGGNGGERRGGNYNRDGKPAPRRDDGAPAAPRRRFGDA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgagtttgaaacctcttttgccgatctggggctgtctgctccaatcatttcc
gccctgaacgatctgggctatgaaaaaccatctccgatccaggctgagtgtattcctcac
ctgttgaacggccgcgacgtgctgggcatggcacagaccggtagtggtaaaactgcagcg
ttctcgctgccgctgctgcacaacctgcaggcagacctgaaagcacctcagatcctggtg
ctggcaccgacccgcgaactggcggttcaggttgccgaagcgatgaccgatttctccaaa
cacatgaacggcgtcaacgtggtagccctgtacggcggccagcgttacgacgtgcagctg
cgcgctctgcgccagggcccgcaaatcgttgtgggtaccccaggccgcctgctggaccac
ctgaagcgcggcaccctgaacctctccaacctgagcggtctggtgctggatgaagccgac
gaaatgctgcgcatgggctttatcgaagacgtagaaaccatcatggctgagatcccggct
gaacatcagaccgcgctgttctccgccaccatgccggaagcgatccgtcgcatcacccgc
cgcttcatgaaagagccgcaggaagtgcgcatccagtccagcgtcaccacccgtccggac
atcagccagagctactggtcggtctacggcatgcgtaaaaacgaagcgctggtgcgtttc
ctggaagccgaagactttgacgcggcgatcatcttcgttcgtaccaagaacgcgaccctg
gaagtggccgaagcgctggagcgcagcggttacagcagcgccgcgctgaacggcgacatg
aaccaggcgctgcgtgagcagaccctggagcgcctgaaagacggtcgtctggatatcctg
attgccaccgacgttgcggcccgtggcctggacgttgagcgcatcagcctggttgtcaac
tatgacatcccgatggactccgagtcttacgttcaccgtatcggccgtaccggtcgtgcg
ggccgcgccggccgcgcgctgctgttcgtggaaaaccgcgaacgccgcctgctgcgcaac
atcgaacgcaccatgaagctgaccatcccggaagtggagctgccgaacgcagaactgctg
ggcgagcgtcgtctggccaagttcgccgcgaaagttcagcagcagctggaaagcagcgat
ctggatctgtaccgcgcgctgctgaccaaactgcagccggaagaagagctggatatggaa
accctggccgcagcgctgctgaaaatggctcagggcgagcgtccgctgatcctgccaccg
gatccggtcttcaagccgcgtcagcgtcgtgagttcaacgaccgtgacgatcgccgcggc
gaccgtcgtgacagccgcgacagccgtgacggcgatcgtccgcgtcgcgaacgtcgtgac
gttggcgaaatgcagctgtaccgcatcgaagtgggccgtgacgatggcgtagaagtccgt
catatcgttggcgctatcgctaacgaaggcgacatcagcagccgttacatcggcaacatc
aagctgttcgcttcccactccaccatcgagctgccaaaaggcatgccgggcgagatcctg
aatcacttcactcgcactcgcatcctgaacaagccgatgaacatgcagctgctgggcgat
gcacagccgttcgaacgtcgcgagcgtcgtgacggtggcaacggtggcgagcgtcgcggc
aacggtcgtccgttcaacggcgaacgtcgcgaaggcggcccacgtcgttccttcggcgaa
cgtcgtgaaggcggtaacggcggcgagcgtcgtggcggtaactacaaccgtgacggcaag
ccggcgccacgccgtgatgacggcgccccggcggcaccacgtcgtcgtttcggcgacgcg
taa
DBGET
integrated database retrieval system
