Serratia sp. B1: QEP77_21910
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Entry
QEP77_21910 CDS
T10611
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
serb Serratia sp. B1
Pathway
serb00071
Fatty acid degradation
serb00280
Valine, leucine and isoleucine degradation
serb00310
Lysine degradation
serb00362
Benzoate degradation
serb00380
Tryptophan metabolism
serb00410
beta-Alanine metabolism
serb00640
Propanoate metabolism
serb00650
Butanoate metabolism
serb00907
Pinene, camphor and geraniol degradation
serb00930
Caprolactam degradation
serb01100
Metabolic pathways
serb01110
Biosynthesis of secondary metabolites
serb01120
Microbial metabolism in diverse environments
serb01200
Carbon metabolism
serb01212
Fatty acid metabolism
Module
serb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
serb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QEP77_21910 (fadB)
00650 Butanoate metabolism
QEP77_21910 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
QEP77_21910 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QEP77_21910 (fadB)
00310 Lysine degradation
QEP77_21910 (fadB)
00380 Tryptophan metabolism
QEP77_21910 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QEP77_21910 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QEP77_21910 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QEP77_21910 (fadB)
00930 Caprolactam degradation
QEP77_21910 (fadB)
Enzymes [BR:
serb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QEP77_21910 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QEP77_21910 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QEP77_21910 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
QEP77_21910 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WIF06381
LinkDB
All DBs
Position
4429252..4431441
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNAPGSVNKLDTRTVASLGEALTVLENQPELKGLLLRST
KAAFIVGADITEFLSLFAAPAEKLQEWLVFANNVFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDALK
VGLVDAVVAPEKLAEAALNMLQQAIDGKLNWRAARQPKLEPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARSNEARALVGIFLNDQFVK
GQAKKLAKNVDAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDISDKSLTLGMNEAAKLL
NKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKVKAAVLSEVENLIGE
DTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDETIAKVVAY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMCKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDNKGKP
RKDNDEQTDALLAEVSQPRQTISDEEIVARMMIPMINEVVRCLEEKIVASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVELAQRYAHLGALYQVPAGLRAKAERNESYYPVATPL
SDVATRQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgataacggcatcgccgagctg
gtgttcaacgcaccgggctcggtcaacaagctggacacccgcaccgtcgccagcctgggc
gaagcgctcaccgtgctggaaaaccagccagagctcaaggggctgctgctgcgctccacc
aaagccgcatttatcgtcggcgccgatatcaccgaattcctttctctgttcgccgcgccg
gctgaaaagctgcaggagtggctggtattcgccaacaacgtctttaaccggctggaagat
ttgccggtgccgaccatttcggccattaacggctatgcgctcggcggcggttgcgaatgc
attttggcgaccgatttccgcgtcgcctcaccggacgcgcgcatcggcctgcctgaaacc
aaattgggcatcatgccgggcttcggcggctccgtccgcctgccgcgcctgctgggtaac
gacagtgcgctggaaatcatcgccgccggcaaagacgtcagcgccaaagacgccttgaaa
gtcggcctggtcgatgcggtagtggcaccggaaaaactggccgaagccgcgctcaacatg
ctgcaacaggcgatcgacggcaagctgaactggcgcgccgcgcgtcaaccgaagctggag
ccgctgaagctcagcccgatcgaggcggcaatgagcttcaccaccgccaaaggcatggtg
ctgcagaccgccggcaaacattacccggcgccgatgaccgcggtgaaaaccattgaagcc
gccgccaagctgggccgcgatgaagcgctgaaactggaaaccgccagcttcgtgccgttg
gcgcgctccaacgaagcgcgtgcgctggtcggcatcttccttaacgatcagttcgtgaag
ggccaggcgaaaaagctggccaagaatgtggacgcgccgaaacaggcggcggtgttgggc
gccggcatcatgggcggcggcatcgcttaccaatcggcgttgaaaggcgtgccggtgatc
atgaaggacatcagcgacaaatcgctgacgttgggcatgaacgaagcggccaagctgctc
aataagcagttggaacgcggcaagctggatggcctgaaaatggcgcaggtgctgtcgacc
attcagccgacgctggactacgccggcatcgagcgcgcgcaggtgatcgtcgaagcggtc
gtggagaacccgaaggtcaaagccgccgtgctgtcggaagtggaaaacctgatcggcgaa
gacaccgttctggcgtcgaacacctcgaccattccgattaatcatctggcaaaatcgttg
aagcgtccgcaaaacttctgcggcatgcacttctttaacccggtacaccgtatgccgctg
gtcgaaatcatccgcggcgaacaaaccagcgacgagaccattgccaaagtggtggcctac
gccagccgcatgggcaaaacgccgatcgtggtgaacgactgcccgggcttcttcgtcaac
cgcgtgctgttcccatacttcgccggcttcagcctgctgctgcgcgacggcgccgacttc
cgtcagatcgataaagtgatggaaaaacagttcggttggccgatgggcccggcctacctg
ctcgacgtggtgggcatcgacaccgcacaccacgcgcaagcggtaatggcggccggcttc
ccggagcgcatgtgcaaagactatcgcgacgccattgacgtgatgttcgacaaccagcgc
ttcggtcagaaaaaccagctgggcttctaccgctacagccaggacaacaaaggtaagccg
cgcaaggacaacgacgagcagaccgatgcgctgctggccgaagtgagccaaccgcgccag
accatcagcgacgaagagatcgttgcgcgcatgatgatcccgatgatcaacgaagtggtg
cgttgcctggaagagaagatcgtcgccagtccggccgaagccgatatggcgttggtctac
ggcatcggtttccctccgttccacggcggcgcgttccgctacctggatacgctcggcacc
gccaactacgttgagctggcccagcgttacgcacacctcggcgccctgtatcaagtgccg
gccggtctgcgcgccaaggccgaacgcaatgaaagctactacccggtggcgacaccgctg
tccgacgtcgcaacccgccaaccggcatga
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