Serratia sp. HRI: GF111_00815
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Entry
GF111_00815 CDS
T10951
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
serh Serratia sp. HRI
Pathway
serh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GF111_00815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
serh03021
]
GF111_00815
Transcription machinery [BR:
serh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GF111_00815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
TnsD
HTH_24
HTH_31
DUF722
HTH_Tnp_4
HAC6_helical
DUF1118
Motif
Other DBs
NCBI-ProteinID:
UBI64481
LinkDB
All DBs
Position
168214..168738
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AA seq
174 aa
AA seq
DB search
MSATASAPHTALSRLYATHHAWLQGWLRRRLGCAFDADDVAQDTFMRLLKSDAAATLREP
KDFLVTVAKRVMVDLFRRRTLERAYLEMLALIPDGYAPSPEQRQSLLESLQQIDAMLDGL
GPKVKQAFLLSQLEGLGYADIAVRLGVSISSVKKYMAKATEHCLLFSLENDVFS
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccgcttccgcaccgcacaccgcgctgtcgcgcctttacgccacccaccat
gcctggttgcagggatggctgcgcaggcggctgggctgcgctttcgacgcggacgacgtg
gcgcaggacaccttcatgcgcctgctgaaaagcgacgccgcggcgaccctgcgcgagccg
aaagattttctggtcaccgtcgccaaacgggtgatggtcgatctgtttcgccgcagaacg
ctggagcgcgcctatctggagatgctggcgctgatcccggatggctatgccccgtcgccg
gagcagcgccagagcctgctggaaagcctgcagcagatagacgccatgctcgacggcctg
gggccgaaggtgaaacaggccttcctgctgtcgcagctcgaaggcctgggctatgcggac
atcgccgtgcgcctcggcgtgtcgatcagctcggttaaaaaatacatggccaaggccacc
gagcattgcctgctgttcagcctggaaaacgacgttttctcatga
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