Serratia sp. HRI: GF111_05285
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Entry
GF111_05285 CDS
T10951
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
serh Serratia sp. HRI
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
serh03000
]
GF111_05285 (prpR)
Transcription factors [BR:
serh03000
]
Prokaryotic type
Helix-turn-helix
Other families
GF111_05285 (prpR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
HTH_30
AAA_3
HTH_23
Xre-like-HTH
AAA
HTH_psq
AAA_2
HTH_Tnp_ISL3
AAA_16
HTH_1
HTH_24
HTH_AsnC-type
HTH_29
Motif
Other DBs
NCBI-ProteinID:
UBI65294
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Position
1091006..1092607
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AA seq
533 aa
AA seq
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MSDHVTPPRTPDKPVIWTVSITRLFDLFRDISLEFDHLATIIPIRLGFEEAVQHIRARLA
TEPCDAIIAAGSNGAYLKSRLSVPVILVKPGGFDLLQALSKARRTADRIGVITYKTPLPA
LMEFQQTFDLPLEQRSYVTEEDARGQIAELKATGIQAVVGAGLISDLAEEAGLTAIFLYS
AATLRAAFSDALDVTRLMLGGGKRGGDYAARNTLQPRYGLGDLQGESPQMEQTRRTIMLY
ARSPAAVLIEGETGTGKELAAQALHREYFSRRGAPARGATPPFVAINCGAIAESLLEAEL
FGYEEGAFTGSRRGGRRGLLETANGGTLFLDEIGEMPLHLQTRLLRALEEKAVTRVGGQQ
PVAVDFRVISATHNHLEQAIQRGDFRADLFYRLSALRLQLPPLRARGDDIAMLAEHFLKR
SLAALDVPLTEPLRAALAGCYAALNHYAWPGNLRELRNMMERVALMLSTGAAPSGETLRW
LLPELAAGTPPETPPAPVSAHEALARCGGDHAAAARLLGISRTTLWRRLKHPA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcacgtcacgccgccccgcacgccggacaaaccggtgatctggaccgtctcc
atcacccgcctgttcgatctgttccgggacatcagcctcgaattcgaccatctggcaacc
atcatcccgatccgcctcggctttgaggaggcggtgcagcacatccgcgcccgcctggcg
accgagccttgcgacgccatcatcgccgccggctccaacggcgcctacctgaaaagccgc
ctgtcggtgccggtcatcctggtcaagcccggcggtttcgatctgctgcaggcgctgagc
aaggcgcgcagaaccgccgatcggatcggcgtcatcacctataaaacccctctgcccgcg
ctgatggagttccagcaaaccttcgatctgccgctggagcagcgcagctacgtcaccgaa
gaggatgcgcgcggccagatcgccgagctgaaagccaccggcattcaggccgtggtcggc
gccggcctcatcagcgatctggcggaagaggccgggctcaccgccatttttctctattcc
gccgccaccctgcgcgccgccttcagcgatgcgctggacgtgacgcgcctgatgctgggc
ggcggcaaacgcggcggcgattacgccgcgcgcaataccctgcagccgcgctatgggctg
ggcgatttgcagggcgagtccccgcagatggagcaaacgcggcgcaccatcatgctgtac
gcccgctcgccggcggcggtattaattgaaggagaaaccggcaccggcaaggagctggcg
gcgcaggcgctccaccgggaatacttttcccggcgcggcgcaccggccagaggcgcgacg
ccgccgttcgtcgccatcaactgcggcgccatcgccgaatcgttgctggaggcggagctg
ttcggctatgaggaaggcgcctttaccggctcacggcgcggcggccgacgcgggctgctg
gaaaccgccaacggtggcaccctgtttctggatgagatcggcgaaatgccgctgcacctg
caaacccggctgctgcgcgcgctggaagagaaggccgtcacccgggtcggcgggcagcag
ccggtggcggtcgactttcgcgtcatcagcgccacccacaaccacctggagcaggcgatt
caacggggcgactttcgcgccgatctgttctaccgcctgagcgccctgcggctgcagctg
ccgccgctgcgggcgcgcggcgacgatatcgcgatgctggcggaacactttctgaaacgg
tcactggcggcgctcgacgtgccgctgacggagccgctgcgcgccgccctggccggctgt
tacgccgcgctgaatcattacgcctggcccggcaacctgcgcgaactgcgcaacatgatg
gagcgggtggcactgatgctgagcaccggcgccgcaccgagcggcgagacgctgcggtgg
ctgctgccggagctggcggcgggcacgccgcccgagacgccgccagcgcccgtctccgcc
cacgaagcgctggcgcgatgtgggggcgaccacgccgccgccgcccggttgctcgggatc
agccgcaccaccttatggcgccggttgaaacacccggcctga
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