Serratia sp. HRI: GF111_07515
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Entry
GF111_07515 CDS
T10951
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
serh Serratia sp. HRI
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
serh03000
]
GF111_07515
Transcription factors [BR:
serh03000
]
Prokaryotic type
Helix-turn-helix
Other families
GF111_07515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
Sigma70_r4_2
HTH_8
Motif
Other DBs
NCBI-ProteinID:
UBI65698
LinkDB
All DBs
Position
complement(1534995..1536128)
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AA seq
377 aa
AA seq
DB search
MLRQTNLLAEATARQIVQRAMGIISHSVNVMDSNGVIIASGNPQRLFQRHEGAVLALAEN
RVVEIDRATAEHLKGVRPGINLPFSFRNQRVGVIGISGEPAEVRAYAELVKMAAEMMVEQ
AALLDQHQWEKRYREELANQLLQPQPNNASLEAMAAYLGLDLRQARIVWIVELQEAQPHL
LRELLAELEATQRDALIAITGFNEMTLLRPACMAQGEWSLKLERQQAQRLQNQLKHRFRV
RLIVGGFYDDPQSAYRSSLTARATQAMAQRLKLRHATLFYHDYPLPSLLCDLGEDWRAQE
LGRPWRTLGEQDEKGVLRGTLRHYFSQNCDQTQTAAQLHIHVNTLRYRLQRIEAITGMKI
NQLTDALRLYIGMLMHD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgctcagacaaaccaatcttctggcggaagccaccgcgcgccagatcgtccagcgggcg
atgggcatcatcagccattccgtcaacgtgatggacagcaacggcgtgattatcgcctcc
ggcaacccccaacgcctgttccagcgccatgaaggcgcggtgctggcgctggcggagaat
cgggtggtggaaatcgaccgcgccaccgccgagcacctgaagggcgtgcggcccggcatc
aatctgccgttcagctttcgcaaccagcgggtgggggtgatcggcatctccggcgaaccg
gccgaggtgcgcgcctacgccgagctggtgaagatggcggcggagatgatggtggagcag
gcggcgctgctggatcagcaccagtgggaaaagcgctaccgggaagagctggcgaaccag
ctgctgcagccgcagccgaacaacgcgtcgctggaagcgatggcagcgtatctgggattg
gatctgcgccaggcgcgcatcgtgtggatcgtcgagctgcaagaggcgcagccgcacctg
ctgcgcgagctgctggcggagctggaggccacccagcgcgatgcgttgatcgccattacc
ggcttcaatgaaatgaccctgctgcgcccggcctgcatggcgcagggcgaatggagcctt
aagctggaacgccagcaggcgcagcgtttgcaaaaccaactcaaacaccgctttcgggtg
cgcttgatcgtcggcggtttttatgacgatccgcaaagcgcctaccgttccagcctgacg
gcgcgcgccacccaggcgatggcgcagcgcctgaaactgcgtcatgccacgctgttctac
cacgactacccgctgccgtcgctgttgtgcgatctgggggaggactggcgcgcgcaggag
ctggggcgcccctggcggacgctgggcgaacaggacgaaaaaggcgtgctgcgcggcacg
ctgcgccactatttttcgcagaattgtgatcagacgcagaccgccgcgcagctgcatatc
cacgtcaataccctgcgctatcgcctgcagcgcatcgaagcgataaccggcatgaaaatc
aatcaattaaccgacgctctgcggttatatatcggtatgttgatgcacgactga
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