Serratia sp. HRI: GF111_07780
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Entry
GF111_07780 CDS
T10951
Symbol
smdA
Name
(GenBank) multidrug efflux ABC transporter permease/ATP-binding subunit SmdA
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
serh Serratia sp. HRI
Pathway
serh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GF111_07780 (smdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serh02000
]
GF111_07780 (smdA)
Transporters [BR:
serh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GF111_07780 (smdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_29
Rad17
AAA_18
TsaE
AAA_23
NB-ARC
AAA_21
Motif
Other DBs
NCBI-ProteinID:
UBI65748
LinkDB
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Position
complement(1587137..1588912)
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AA seq
591 aa
AA seq
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MRLFAQIGWYFRREWRRYLGAVVLLIVIAILQLLPPKLVGIIVDGVTEKQMSTGVLMAWL
GLMIGTAIVVYLLRYVWRVLLFGASYQLAVELRENFYRQLSRQNPAFYLRHRTGDLMARA
TNDVDRVVFAAGEGVLTLVDSLVMGLVVLVVMSTQISWQLTVLALIPMPLMAIAIKYYGD
QLHQRFKSAQAAFSSLNDQAQESMTSIRMIKAFGLEDHQSNRFAEVAAQTGAKNMHVARV
DARFDPTIYIAIGASNLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNI
VERGSAAYSRIRSLLDEAPAVQDGPQALPAGRGVLDVDIRAFHYPENPHPALHDVALTLK
PGQMLGLCGPTGAGKSTLLSLIQRQFDVDQGQIRYHGLPLPQVKLDDWRSRLSVVSQTPF
LFSDTVANNIALGHPGATQAQIEQAARLASVHEDILRLPQGYDTEVGERGVMLSGGQKQR
ISIARALLLDAEILILDDALSAVDGRTEHQILHNLRSWGQDRTVIISAHRLSALTEASEI
LVMQHGGVAQRGDPAALAAQPGWYRDMYRYQQLEAALDEAPENGEEALADE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgagattatttgctcaaatcggctggtacttccgccgggagtggcgccgctacctcggg
gcggtggtgctgctgatcgtcatcgccatcctgcaactgctgccgcctaagctggtcggc
atcatcgtggacggcgtcaccgaaaaacaaatgtctaccggcgtgctgatggcctggctc
gggctgatgatcggcaccgcgatcgtcgtttacctgctgcgctatgtgtggcgggtgttg
ctgttcggcgcctcctaccagctggcggtcgagctgcgcgaaaacttttaccgccagctc
agccggcaaaacccggcgttctacctgcgccaccgcaccggcgatctgatggcgcgcgcc
accaacgacgtggaccgcgtggtgttcgccgccggcgaaggcgtgctgacgctggtggat
tcgctggtgatggggttggtggtgctggtggtgatgagcacccaaatcagctggcagctg
acggtgttggcgttgatcccgatgccgctgatggcgatcgccatcaaatattacggtgac
cagctgcaccagcgctttaaatcggcacaggcggcgttttccagcctgaacgatcaggcg
caggaaagcatgaccagcatccgcatgatcaaggcctttgggctggaagatcaccaatcc
aaccgcttcgccgaggtggcggcgcagaccggcgccaagaacatgcacgtggcgcgggtg
gatgcgcgcttcgatccgaccatttatatcgccatcggcgcctctaacctgctggccatc
ggcggcggcagctggatggtggtgaacggatcgctgacgctcgggcagctgaccagcttt
gtgatgtatctcggcctgatgatctggccgatgctggcgctggcctggatgttcaacatc
gtcgaacgcggcagcgcggcctatagccgcatccgcagcctgctcgacgaggcgccggcg
gtgcaggacggcccgcaggcgttgccggccggccgcggcgtgctggacgtggatatccgc
gcgttccactacccggaaaacccgcatccggctctgcatgacgtggcgctgacgctgaag
ccggggcagatgctggggctgtgcgggccgaccggcgccggcaagtcgacgctgttgtcg
ctgatccagcgccagttcgacgtcgaccaagggcagatccgctatcacggcctgccgttg
ccgcaggtcaaactcgacgactggcgttcgcggctgtcggtggtgagccagacgccgttc
ctgttctccgataccgtggcgaacaacatcgcgctgggtcatccgggggcgacgcaggcg
cagattgaacaggcggcgcggttggccagcgtccatgaggacattctgcggctgccgcag
ggctatgacaccgaagtgggcgaacgcggcgtgatgctgtcgggcggccagaaacagcgc
atctccatcgcgcgcgcgttgctgctggatgcggagatcctgatcctcgacgatgcgttg
tcggcggtggacggccgtaccgagcaccagatcctgcacaacctgcgcagctgggggcaa
gatcgcacggtgatcatcagcgcgcaccggctgtcggcattgaccgaagccagcgaaatc
ctggtgatgcagcacggcggcgtggcgcagcgcggcgatccggcggcgctggcggcgcag
ccgggctggtatcgcgatatgtaccgttatcagcagctggaagcggcgctggacgaagcg
ccggaaaacggcgaggaggcgttggccgatgaataa
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