Serratia sp. HRI: GF111_08065
Help
Entry
GF111_08065 CDS
T10951
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
serh Serratia sp. HRI
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serh03400
]
GF111_08065 (sbcC)
DNA repair and recombination proteins [BR:
serh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GF111_08065 (sbcC)
Archaeal homologous recombinant proteins
GF111_08065 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
cobW
AAA_21
LRR_NXF1-5
TsaE
AAA_14
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
UBI65804
LinkDB
All DBs
Position
1651145..1654396
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLEITAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKQAKTDLDALHQRASGIELLNDEQRHSLTERLTALSAQESALGKQTQQ
QQQALSWLQQWQRLQQQQNEGQRRLETALREQAEAAPQLQRLALSEPAEKLRPLRGERDR
CRAELQTIQQQAAQLTQQQEQHSAQLAPLQQAVEKARLAQQAHAEHMRQQQQLIDDQVAP
LDHQIAQLQSTQAERRQAGDAAAQQCAQQQTALEQLTAQRSQLTAQAAQHQQQLNALIEA
LAAQRQRQQVLEAQTPLAPLRQRLSALADLRPTRQQLFTLASLYRQTRERLARQQAEHAE
RQTQLAGLQHQLENARQQFKQHKAQLQEVERIHELEKRIVSLEAERALLQSGAPCPLCGS
TSHPAVEQYQAVQPSATEQRLVEMRTLAEKLQTQGTELRTRCEGLQEQQQRQQQAIAQDE
QQLAAQQQQWQQLSAPLAFDFTLAEGEQLSAWLSGCDDEERHGQHALQQHEQAAQAVQQA
KDALAALQTQQQQAQQQLALLEERFTLLQKTHADSLQQQQDLLQRWQEGEKTLAERRAQR
LALFGEQRVAEVREQLRAKQTACEQASLQAAEQWQKAQELRERLAGQQAGLQQQHAQMQE
RLQQAEQQWQQALADSEFADETAFAAALLDDALRRELQQRKEQLQQRQVEAAALLAQATQ
TLEQHRQNRPEGTDEANADLDALTQSLAELAQQLKALQLSQGELRNQLESDAARRLNQQA
LFEQIARSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANLQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcagcctgcggttaaaaaacctcaactcgctgcagggcgagtggaaaatt
gacttcaccgccgagccgttcgccagcaacggcctgttcgccattaccggcccgaccggc
gcgggcaaaaccaccctgctggacgccatctgcctggcgctgtaccaccagacgccgcgt
ctcaacgtcacgccgagccagaatgaactgatgacccgccacaccgccgaatcgctggcg
gaggtcgaattcgaggtcaagggcgtcggctatcgcgccttctggagccagcgccgcgcc
aaaaacgcgccggacggcaatctgcaggcgccgaaggtcgaactggcgcgccgcgaggac
ggcaagatcctggcggataaagtgcgcgataagctggagatcaccgcggccatcaccggg
ctggacttcggccgcttcaccaaatcgatgatgctgtctcaggggcagttcgccgcgttc
ctcaacgccgacgccaacgatcgcgccgagctgttggaagagctgaccggcaccgaaatc
tacgggcggctgtccgaacaggtgttcgaatcccacaagcaggccaaaactgacctggat
gcgttgcaccagcgcgccagcggcatcgagctgctgaacgatgaacagcgccactccctg
acggaacggctgacggcgctgagcgcgcaggaaagcgctctcggcaagcaaacccagcaa
cagcaacaggcgctgagctggctgcagcaatggcagcgcctccagcaacagcaaaacgag
gggcaacggcggctggaaaccgccctgcgcgagcaggccgaggccgccccgcagctgcag
cggctggcgctgagcgaaccggccgagaaattgcggccgctgcgcggcgaacgcgatcgc
tgccgcgccgagctgcagacgatacaacagcaggcagcccagctgacgcagcaacaggag
cagcactcggcgcagctggcgccgctgcagcaggcggtggaaaaggcccgtctggcgcag
caagcccatgccgagcatatgcggcaacagcaacagctgatcgatgaccaggtcgccccg
ctcgaccatcagatcgcccaactgcagtcgacgcaggccgagcggcgacaggccggcgat
gccgccgcgcagcagtgcgcccagcagcagaccgcactggagcagctcaccgcccagcgc
agccagctgacggcgcaggccgcacagcatcagcagcagttgaacgcgctgatcgaagcg
ctggccgctcaacggcaacggcagcaggtgctggaggcacaaaccccgctggccccgctg
cgccagcgcctgagcgccctggcggatctgcgcccgacgcgccagcagttatttacgctc
gcttctctttaccgtcagacccgcgagcgtctggcccggcaacaggcggagcacgccgag
cggcaaacgcagctcgccgggctgcaacaccagctggagaacgcgcgtcagcaattcaaa
cagcacaaggcgcagctgcaggaagtggagcggatccacgagctggaaaaacgcatcgtc
agtctggaagcggagcgcgccctgttgcagagcggcgcaccctgcccgctgtgcggctcc
accagccacccggcggtggagcaatatcaggcggtgcagccttcggcgacggaacaacgc
ttggttgagatgcgcaccctcgccgagaaactgcaaacccagggcaccgagctgcgcacc
cgctgtgaaggcctgcaagagcagcagcaacgccagcagcaggctatcgcgcaggatgag
cagcagctggctgcccaacagcagcagtggcagcagctcagcgcaccgctggcattcgac
tttaccctggcggagggcgagcaactcagcgcctggctgagcggctgcgacgacgaagag
cggcacgggcagcacgcactgcagcagcatgaacaggcggcgcaggcggtacaacaggca
aaagacgcgctcgccgctctgcaaacgcagcagcaacaggcgcagcaacagctggcgttg
ctcgaagagcgctttacgctgctgcagaaaacccacgccgacagcctgcaacagcagcaa
gacctgcttcaacgctggcaggaaggcgagaagaccctcgccgagcggcgcgcgcagcgg
ctggcactgtttggcgaacagcgagtcgccgaggtgcgggaacagctgcgcgccaaacaa
accgcctgtgaacaggccagcttacaggccgccgagcagtggcaaaaggcgcaggaactg
cgcgagcgcctggccggccagcaggccgggttgcaacaacagcacgcccaaatgcaggaa
cggctgcaacaggcggagcagcaatggcagcaggcgctggccgacagcgaattcgccgat
gaaactgccttcgccgccgcgctgctggacgacgccctgcgccgcgaattgcagcagcgc
aaagagcagctgcaacagcggcaggtagaggctgcggccctgctggctcaggcgacgcaa
acgctggagcagcatcggcagaaccgcccggaagggacggatgaagccaacgcggatctc
gacgcactcacccaatcgctggccgagctggcacagcagttgaaggcgctgcagctgagc
cagggcgagctgcgcaaccagctggaaagcgacgccgcccgccgtctcaatcaacaggcg
ctgttcgagcaaatcgcccgcagccagcaagactacgacgactggagctacctcaaccag
ctgatcggctcgaaagaaggcgacaagttccgccgcttcgcgcaggggctgacgctcgat
catctggtttatctggccaaccttcagctcggccggctgcacgggcgctacctgctgcag
cgcaaaaccagcgacgcgctggagctgcaggtggtggacacctggcaggccgacgcgctg
cgcgatacccgtaccctgtccggcggcgagagcttcctggtcagcctggcgctggcgctg
gcgttgtccgatctggtcagccacaaaaccagcatcgactcgctgttcctcgacgaaggc
ttcggcacgctggacgccgaaaccctcgataccgcgctggacgcactggacagcctgaat
gcttccggtaaaaccattggcgtgatcagccacgtcgaggcgatgaaagagcgcattccg
gtgcagatcaaagtgaaaaaggtcaacgggctcggcgtcagccggctggaggcgcacttc
aggctggaatga
DBGET
integrated database retrieval system
